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JAL-3725 restrict mapped virtual feature location to mapped region
[jalview.git]
/
src
/
jalview
/
datamodel
/
SeqCigar.java
diff --git
a/src/jalview/datamodel/SeqCigar.java
b/src/jalview/datamodel/SeqCigar.java
index
c2a6a9c
..
34697b3
100644
(file)
--- a/
src/jalview/datamodel/SeqCigar.java
+++ b/
src/jalview/datamodel/SeqCigar.java
@@
-587,6
+587,7
@@
public class SeqCigar extends CigarSimple
+ (bounds[2] == 0 ? -1 : bounds[2]));
seqs[i].setDatasetSequence(ref);
seqs[i].setDescription(ref.getDescription());
+ SeqsetUtils.SeqCharacterUnhash(seqs[i],alseqs[i].seqProps,true,true);
}
if (segments != null)
{