Merge branch 'develop' into bug/JAL-2541cutRelocateFeatures

[jalview.git] / src / jalview / datamodel / Sequence.java

diff --git a/src/jalview/datamodel/Sequence.java b/src/jalview/datamodel/Sequence.java
index 006afb3..eaeed9c 100755 (executable)
--- a/src/jalview/datamodel/Sequence.java
+++ b/src/jalview/datamodel/Sequence.java
@@ -74,11 +74,6 @@ public class Sequence extends ASequence implements SequenceI
    */
   Vector<AlignmentAnnotation> annotation;
 
-  /**
-   * The index of the sequence in a MSA
-   */
-  int index = -1;
-
   private SequenceFeaturesI sequenceFeatureStore;
 
   /*
@@ -1693,28 +1688,6 @@ public class Sequence extends ASequence implements SequenceI
     }
   }
 
-  /**
-   * @return The index (zero-based) of this sequence in the MSA. It returns
-   *         {@code -1} if this information is not available.
-   */
-  @Override
-  public int getIndex()
-  {
-    return index;
-  }
-
-  /**
-   * Defines the (zero-based) position of this sequence in the MSA. Use the
-   * value {@code -1} if this information is undefined.
-   * 
-   * @param value
-   */
-  @Override
-  public void setIndex(int value)
-  {
-    index = value;
-  }
-
   @Override
   public void setRNA(RNA r)
   {