/*
- * Jalview - A Sequence Alignment Editor and Viewer
- * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
- *
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
+ * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ *
* This program is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
- *
+ *
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
- *
+ *
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
}
}
setDatasetSequence(seq.getDatasetSequence());
- if (datasetSequence==null && seq.getDBRef() != null)
+ if (datasetSequence == null && seq.getDBRef() != null)
{
// only copy DBRefs if we really are a dataset sequence
DBRefEntry[] dbr = seq.getDBRef();
return map;
}
+
/*
* (non-Javadoc)
*
}
return map;
}
+
/*
* (non-Javadoc)
*
{
createNewDs = true;
newend--; // decrease end position by one for the deleted residue
- // and search further
+ // and search further
}
}
}
public DBRefEntry[] getDBRef()
{
- if (dbrefs==null && datasetSequence!=null && this!=datasetSequence)
+ if (dbrefs == null && datasetSequence != null
+ && this != datasetSequence)
{
return datasetSequence.getDBRef();
}