changeCase, removeGaps moved to commands package

[jalview.git] / src / jalview / datamodel / SequenceGroup.java

diff --git a/src/jalview/datamodel/SequenceGroup.java b/src/jalview/datamodel/SequenceGroup.java
index 679997e..2bdd5f8 100755 (executable)
--- a/src/jalview/datamodel/SequenceGroup.java
+++ b/src/jalview/datamodel/SequenceGroup.java
@@ -200,6 +200,18 @@ public class SequenceGroup
       }\r
     }\r
 \r
+    public SequenceI[] getSequencesAsArray(boolean includeHidden)\r
+    {\r
+      Vector tmp = getSequences(includeHidden);\r
+      if(tmp==null)\r
+        return null;\r
+      SequenceI [] result = new SequenceI[tmp.size()];\r
+      for(int i=0; i<result.length; i++)\r
+        result[i] = (SequenceI)tmp.elementAt(i);\r
+\r
+      return result;\r
+    }\r
+\r
     /**\r
      * DOCUMENT ME!\r
      *\r