JAL-2629 revising hmmer annotation updating (wip)

[jalview.git] / src / jalview / datamodel / SequenceGroup.java

diff --git a/src/jalview/datamodel/SequenceGroup.java b/src/jalview/datamodel/SequenceGroup.java
index d1e7b83..676f318 100755 (executable)
--- a/src/jalview/datamodel/SequenceGroup.java
+++ b/src/jalview/datamodel/SequenceGroup.java
@@ -278,6 +278,7 @@ public class SequenceGroup implements AnnotatedCollectionI
         seqs[ipos].setDescription(seq.getDescription());
         seqs[ipos].setDBRefs(seq.getDBRefs());
         seqs[ipos].setSequenceFeatures(seq.getSequenceFeatures());
+        seqs[ipos].setIsHMMConsensusSequence(seq.isHMMConsensusSequence());
         if (seq.getDatasetSequence() != null)
         {
           seqs[ipos].setDatasetSequence(seq.getDatasetSequence());