public ColourSchemeI cs;
int startRes = 0;
int endRes = 0;
- Color outlineColour = Color.black;
+ public Color outlineColour = Color.black;
+ public Color idColour = null;
public int thresholdTextColour = 0;
public Color textColour = Color.black;
public Color textColour2 = Color.white;
}
/**
- * DOCUMENT ME!
+ * Add s to this sequence group
*
- * @param s DOCUMENT ME!
- * @param recalc DOCUMENT ME!
+ * @param s alignment sequence to be added
+ * @param recalc true means Group's conservation should be recalculated
*/
public void addSequence(SequenceI s, boolean recalc)
{
}
/**
- * DOCUMENT ME!
+ * calculate residue conservation for group
*/
public void recalcConservation()
{
return seqs;
}
+
+ /**
+ * @return the idColour
+ */
+ public Color getIdColour()
+ {
+ return idColour;
+ }
+
+ /**
+ * @param idColour the idColour to set
+ */
+ public void setIdColour(Color idColour)
+ {
+ this.idColour = idColour;
+ }
}