JAL-2629 remove sequence and group HMMER options

[jalview.git] / src / jalview / datamodel / SequenceGroup.java

diff --git a/src/jalview/datamodel/SequenceGroup.java b/src/jalview/datamodel/SequenceGroup.java
index 179880e..7d124da 100755 (executable)
--- a/src/jalview/datamodel/SequenceGroup.java
+++ b/src/jalview/datamodel/SequenceGroup.java
@@ -25,6 +25,7 @@ import jalview.analysis.Conservation;
 import jalview.renderer.ResidueShader;
 import jalview.renderer.ResidueShaderI;
 import jalview.schemes.ColourSchemeI;
+import jalview.util.MessageManager;
 
 import java.awt.Color;
 import java.util.ArrayList;
@@ -697,8 +698,8 @@ public class SequenceGroup implements AnnotatedCollectionI
     {
       getInformation();
     }
-    information.label = "Information for " + getName();
-    information.description = "Percent Identity";
+    information.description = MessageManager
+            .getString("label.information_description");
     informationData = cnsns;
     // preserve width if already set
     int aWidth = (information.annotations != null)
@@ -708,7 +709,7 @@ public class SequenceGroup implements AnnotatedCollectionI
     information.annotations = null;
     information.annotations = new Annotation[aWidth]; // should be alignment
                                                       // width
-
+    information.calcId = "HMM";
     AAFrequency.completeInformation(information, cnsns, startRes,
             endRes + 1, ignoreBelowBackground, showSequenceLogo, nseq); // TODO:
                                                                         // setting
@@ -1188,6 +1189,7 @@ public class SequenceGroup implements AnnotatedCollectionI
       information.groupRef = this;
       information.label = getName() + "_HMM";
       information.description = "Information content, measured in bits";
+      information.calcId = "HMM";
     }
     return information;
   }