+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.datamodel.xdb.uniprot;
/**
{
private String type;
- private String description;
+ private String description = null;
+
+ private String original = null;
+
+ private String variation = null;
private String status;
public String getDescription()
{
- return description;
+ if (description == null && variation == null && original == null)
+ {
+ return null;
+ }
+ return (description == null ? "" : description)
+ + (variation != null
+ ? (description != null ? " " : "") + "Variation: '"
+ + variation + "'"
+ : "")
+ + (original != null
+ ? ((description != null || variation != null) ? " "
+ : "") + "Original: '" + original + "'"
+ : "");
}
public void setDescription(String d)
this.begin = p;
this.end = p;
}
+
+ public String getOriginal()
+ {
+ return original;
+ }
+
+ public void setOriginal(String original)
+ {
+ this.original = original;
+ }
+
+ public String getVariation()
+ {
+ return variation;
+ }
+
+ public void setVariation(String variant)
+ {
+ this.variation = variant;
+ }
}