JAL-1953 first pass of adding javadoc, some methods renamed

[jalview.git] / src / jalview / ext / archaeopteryx / AptxControlPanel.java

diff --git a/src/jalview/ext/archaeopteryx/AptxControlPanel.java b/src/jalview/ext/archaeopteryx/AptxControlPanel.java
index 2744908..aa0ffc6 100644 (file)
--- a/src/jalview/ext/archaeopteryx/AptxControlPanel.java
+++ b/src/jalview/ext/archaeopteryx/AptxControlPanel.java
@@ -4,10 +4,23 @@ import jalview.ext.treeviewer.TreeControlsI;
 
 import org.forester.archaeopteryx.ControlPanel;
 
+/**
+ * Wrapper for the Archaeopteryx control panel (left side panel) Currently just
+ * used for refreshing Aptx upon initialisation.
+ * 
+ * @author kjvanderheide
+ *
+ */
 public class AptxControlPanel implements TreeControlsI
 {
   ControlPanel aptxCp;
 
+  /**
+   * Note that this control panel MUST be part of an Archaeopteryx frame
+   * 
+   * @param aptxControlPanel
+   *          the original Control Panel from Archaeopteryx
+   */
   protected AptxControlPanel(ControlPanel aptxControlPanel)
   {
     aptxCp = aptxControlPanel;
@@ -15,13 +28,6 @@ public class AptxControlPanel implements TreeControlsI
   }
 
   @Override
-  public void defaultSettings()
-  {
-    // TODO Auto-generated method stub
-
-  }
-
-  @Override
   public void displayEntireTree()
   {
     aptxCp.showWhole();