JAL-2795 Added get and set values to the converted matrix

[jalview.git] / src / jalview / ext / archaeopteryx / ArchaeopteryxInit.java

diff --git a/src/jalview/ext/archaeopteryx/ArchaeopteryxInit.java b/src/jalview/ext/archaeopteryx/ArchaeopteryxInit.java
index 7ca870c..3bd9d19 100644 (file)
--- a/src/jalview/ext/archaeopteryx/ArchaeopteryxInit.java
+++ b/src/jalview/ext/archaeopteryx/ArchaeopteryxInit.java
@@ -28,8 +28,9 @@ public final class ArchaeopteryxInit
   public static MainFrame createInstance(
           TreeBuilder calculatedTree)
   {
-    ArchaeopteryxTreeBuilder aptxTreeBuilder = new ArchaeopteryxTreeBuilder();
-    Phylogeny aptxTree = aptxTreeBuilder.buildAptxTree(calculatedTree);
+    ArchaeopteryxTreeConverter aptxTreeBuilder = new ArchaeopteryxTreeConverter(
+            calculatedTree);
+    Phylogeny aptxTree = aptxTreeBuilder.buildAptxTree();
     Phylogeny[] aptxTrees = { aptxTree }; // future possibility to load in
                                           // several trees simultaneously