JAL-2794 reorganized node select code, added subtree selection support

[jalview.git] / src / jalview / ext / archaeopteryx / ArchaeopteryxTreeConverter.java

diff --git a/src/jalview/ext/archaeopteryx/ArchaeopteryxTreeConverter.java b/src/jalview/ext/archaeopteryx/ArchaeopteryxTreeConverter.java
index 0bdd4e2..21a4e30 100644 (file)
--- a/src/jalview/ext/archaeopteryx/ArchaeopteryxTreeConverter.java
+++ b/src/jalview/ext/archaeopteryx/ArchaeopteryxTreeConverter.java
@@ -16,8 +16,11 @@ import org.forester.phylogeny.data.NodeData;
 import org.forester.phylogeny.data.Sequence;
 
 /**
- * Note that this currently demands a 1:1 relationship between nodes and
- * sequences
+ * Class for converting trees made in Jalview (through TreeBuilder) to trees
+ * compatible with Forester (Phylogeny objects).
+ * 
+ * Note that this currently demands a 1:1 relationship between tree nodes and
+ * the sequences used for generating them.
  * 
  * @author kjvanderheide
  *