private EnsemblFeatureType[] featuresWanted = { EnsemblFeatureType.cds,
EnsemblFeatureType.exon, EnsemblFeatureType.variation };
+ /**
+ * Default constructor (to use rest.ensembl.org)
+ */
+ public EnsemblFeatures()
+ {
+ super();
+ }
+
+ /**
+ * Constructor given the target domain to fetch data from
+ *
+ * @param d
+ */
+ public EnsemblFeatures(String d)
+ {
+ super(d);
+ }
+
@Override
public String getDbName()
{
protected URL getUrl(List<String> ids) throws MalformedURLException
{
StringBuffer urlstring = new StringBuffer(128);
- urlstring.append(ENSEMBL_REST).append("/overlap/id/")
- .append(ids.get(0));
+ urlstring.append(getDomain()).append("/overlap/id/").append(ids.get(0));
// @see https://github.com/Ensembl/ensembl-rest/wiki/Output-formats
urlstring.append("?content-type=text/x-gff3");