* (it is a sub-type of sequence_variant)
*/
String[] soTerms = new String[] {
- SequenceOntologyI.NMD_TRANSCRIPT_VARIANT, SequenceOntologyI.EXON,
+ SequenceOntologyI.NMD_TRANSCRIPT_VARIANT,
+ SequenceOntologyI.TRANSCRIPT, SequenceOntologyI.EXON,
SequenceOntologyI.CDS };
List<SequenceFeature> sfs = gene.getFeatures().getFeaturesByOntology(
soTerms);