* @return
* @throws IOException
*/
- protected String parseSymbolResponse(BufferedReader br)
- throws IOException
+ protected String parseSymbolResponse(BufferedReader br) throws IOException
{
JSONParser jp = new JSONParser();
String result = null;
{
for (String query : queries)
{
- for (Species taxon : Species.values())
+ for (Species taxon : Species.getModelOrganisms())
{
- if (taxon.isModelOrganism())
+ URL url = getUrl(query, taxon);
+ if (url != null)
{
- URL url = getUrl(query, taxon);
- if (url != null)
+ br = getHttpResponse(url, ids);
+ if (br != null)
{
- br = getHttpResponse(url, ids);
- }
- String geneId = parseSymbolResponse(br);
- if (geneId != null)
- {
- result.add(geneId);
+ String geneId = parseSymbolResponse(br);
+ if (geneId != null)
+ {
+ result.add(geneId);
+ }
}
}
}