interface for handlers of alignmentViewPanel events

[jalview.git] / src / jalview / ext / jmol / JmolCommands.java

diff --git a/src/jalview/ext/jmol/JmolCommands.java b/src/jalview/ext/jmol/JmolCommands.java
index acf27f6..9d01eab 100644 (file)
--- a/src/jalview/ext/jmol/JmolCommands.java
+++ b/src/jalview/ext/jmol/JmolCommands.java
@@ -16,6 +16,8 @@ import java.util.ArrayList;
 \r
 /**\r
  * Routines for generating Jmol commands for Jalview/Jmol binding\r
+ * another cruisecontrol test.\r
+ * \r
  * @author JimP\r
  *\r
  */\r
@@ -99,6 +101,11 @@ public class JmolCommands
         }\r
       }\r
     }\r
+    {\r
+      // add final chunk\r
+      str.add(command.toString());\r
+      command.setLength(0);\r
+    }\r
     return str.toArray(new String[str.size()]);\r
   }\r
 \r