JAL-1925 update source version in license

[jalview.git] / src / jalview / ext / jmol / PDBFileWithJmol.java

diff --git a/src/jalview/ext/jmol/PDBFileWithJmol.java b/src/jalview/ext/jmol/PDBFileWithJmol.java
index ddfa1b0..8171f9d 100644 (file)
--- a/src/jalview/ext/jmol/PDBFileWithJmol.java
+++ b/src/jalview/ext/jmol/PDBFileWithJmol.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2)
+ * Copyright (C) 2015 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -86,8 +86,9 @@ public class PDBFileWithJmol extends AlignFile implements
                 null, "-x -o -n", this);
       } catch (ClassCastException x)
       {
-        throw new Error(MessageManager.formatMessage("error.jmol_version_not_compatible_with_jalview_version", new String[]{JmolViewer.getJmolVersion()}),
-                x);
+        throw new Error(MessageManager.formatMessage(
+                "error.jmol_version_not_compatible_with_jalview_version",
+                new String[] { JmolViewer.getJmolVersion() }), x);
       }
     }
     return viewer;
@@ -236,7 +237,8 @@ public class PDBFileWithJmol extends AlignFile implements
                * equivalent (e.g. MSE with MET->M) to maximise sequence matching
                */
               String threeLetterCode = group.getGroup3();
-              String canonical = ResidueProperties.getCanonicalAminoAcid(threeLetterCode);
+              String canonical = ResidueProperties
+                      .getCanonicalAminoAcid(threeLetterCode);
               if (canonical != null
                       && !canonical.equalsIgnoreCase(threeLetterCode))
               {