import jalview.gui.SequenceFetcher;
import jalview.util.MessageManager;
+import java.util.HashMap;
import java.util.HashSet;
+import java.util.Map;
@SuppressWarnings("serial")
public class PDBFTSPanel extends GFTSPanel
private String ftsFrameTitle = defaultFTSFrameTitle;
+ private static Map<String, Integer> tempUserPrefs = new HashMap<String, Integer>();
+
public PDBFTSPanel(SequenceFetcher seqFetcher)
{
+ super();
+ pageLimit = PDBFTSRestClient.getInstance().getDefaultResponsePageSize();
this.seqFetcher = seqFetcher;
- this.progressIdicator = (seqFetcher == null) ? null : seqFetcher
+ this.progressIndicator = (seqFetcher == null) ? null : seqFetcher
.getProgressIndicator();
}
-
@Override
- public void searchAction()
+ public void searchAction(boolean isFreshSearch)
{
+ if (isFreshSearch)
+ {
+ offSet = 0;
+ }
new Thread()
{
@Override
String searchTarget = ((FTSDataColumnI) cmb_searchTarget
.getSelectedItem()).getCode();
wantedFields = PDBFTSRestClient.getInstance()
- .getAllDefaulDisplayedDataColumns();
+ .getAllDefaultDisplayedFTSDataColumns();
String searchTerm = decodeSearchTerm(txt_search.getText(),
searchTarget);
request.setResponseSize(100);
request.setFieldToSearchBy("(" + searchTarget + ":");
request.setSearchTerm(searchTerm + ")");
+ request.setOffSet(offSet);
request.setWantedFields(wantedFields);
FTSRestClientI pdbRestCleint = PDBFTSRestClient.getInstance();
FTSRestResponse resultList;
{
getResultTable().setModel(
FTSRestResponse.getTableModel(request,
- resultList.getSearchSummary()));
+ resultList.getSearchSummary()));
FTSRestResponse.configureTableColumn(getResultTable(),
- wantedFields);
+ wantedFields, tempUserPrefs);
getResultTable().setVisible(true);
}
long endTime = System.currentTimeMillis();
- int resultSetCount = resultList.getNumberOfItemsFound();
- String result = (resultSetCount > 1) ? MessageManager
+ totalResultSetCount = resultList.getNumberOfItemsFound();
+ resultSetCount = resultList.getSearchSummary() == null ? 0
+ : resultList.getSearchSummary().size();
+ String result = (resultSetCount > 0) ? MessageManager
.getString("label.results") : MessageManager
.getString("label.result");
- updateSearchFrameTitle(defaultFTSFrameTitle + " - "
- + resultSetCount + " " + result + " ("
- + (endTime - startTime) + " milli secs)");
+
+ if (isPaginationEnabled() && resultSetCount > 0)
+ {
+ updateSearchFrameTitle(defaultFTSFrameTitle
+ + " - "
+ + result
+ + " "
+ + totalNumberformatter.format((Number) (offSet + 1))
+ + " to "
+ + totalNumberformatter
+ .format((Number) (offSet + resultSetCount))
+ + " of "
+ + totalNumberformatter
+ .format((Number) totalResultSetCount) + " "
+ + " (" + (endTime - startTime) + " milli secs)");
+ }
+ else
+ {
+ updateSearchFrameTitle(defaultFTSFrameTitle + " - "
+ + resultSetCount + " " + result + " ("
+ + (endTime - startTime) + " milli secs)");
+ }
+
setSearchInProgress(false);
+ refreshPaginatorState();
+ updateSummaryTableSelections();
}
}
}.start();
try
{
primaryKeyColIndex = getFTSRestClient().getPrimaryKeyColumIndex(
- wantedFields,
- false);
+ wantedFields, false);
} catch (Exception e)
{
- // TODO Auto-generated catch block
e.printStackTrace();
}
int[] selectedRows = getResultTable().getSelectedRows();
+ String searchTerm = txt_search.getText();
for (int summaryRow : selectedRows)
{
String idStr = getResultTable().getValueAt(summaryRow,
- primaryKeyColIndex)
- .toString();
- String searchTerm = txt_search.getText();
+ primaryKeyColIndex).toString();
+ selectedIdsSet.add(getPDBIdwithSpecifiedChain(idStr, searchTerm));
+ }
+
+ for (String idStr : paginatorCart)
+ {
selectedIdsSet.add(getPDBIdwithSpecifiedChain(idStr, searchTerm));
}
delayAndEnableActionButtons();
}
-
public static String getPDBIdwithSpecifiedChain(String pdbId,
String searchTerm)
{
return pdbIdWithChainCode;
}
-
-
@Override
public FTSRestClientI getFTSRestClient()
{
return ftsFrameTitle;
}
-
@Override
- public void prevPageAction()
- {
- // TODO pagination not yet implemented for PDB FTS
-
- }
-
- @Override
- public void nextPageAction()
+ public boolean isPaginationEnabled()
{
- // TODO pagination not yet implemented for PDB FTS
-
+ return true;
}
@Override
- public boolean isPaginationEnabled()
+ public Map<String, Integer> getTempUserPrefs()
{
- return false;
+ return tempUserPrefs;
}
}