import jalview.api.AlignViewportI;
import jalview.api.AlignmentViewPanel;
import jalview.api.FeatureSettingsControllerI;
+import jalview.api.FeatureSettingsModelI;
import jalview.api.SplitContainerI;
import jalview.api.ViewStyleI;
import jalview.api.analysis.SimilarityParamsI;
PrintWriter out = new PrintWriter(
new FileWriter(backupfiles.getTempFilePath()));
- // TESTING code here
- boolean TESTING = true;
- if (TESTING)
- {
- out.print("; TESTSTART\n");
- int count = 20;
- for (int i = 0; i < count; i++)
- {
- // Thread.sleep(1000);
- out.println("; TEST: " + (count - 1 - i));
- }
- }
out.print(output);
- if (TESTING)
- {
- out.print("; TESTEND\n");
- }
out.close();
this.setTitle(file);
statusBar.setText(MessageManager.formatMessage(
}
/**
- * DOCUMENT ME!
+ * Opens a Finder dialog
*
* @param e
- * DOCUMENT ME!
*/
@Override
public void findMenuItem_actionPerformed(ActionEvent e)
{
- new Finder();
+ new Finder(alignPanel);
}
/**
@Override
public void finished()
{
+
+ for (FeatureSettingsModelI srcSettings : dbRefFetcher
+ .getFeatureSettingsModels())
+ {
+
+ alignPanel.av.mergeFeaturesStyle(srcSettings);
+ }
AlignFrame.this.setMenusForViewport();
}
});
@Override
public void finished()
{
+ FeatureSettingsModelI srcSettings = dassource[0]
+ .getFeatureColourScheme();
+ alignPanel.av.mergeFeaturesStyle(
+ srcSettings);
AlignFrame.this.setMenusForViewport();
}
});