JAL-1486 fixed flatfile output of visible region for consensus sequence

[jalview.git] / src / jalview / gui / AlignFrame.java

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index 68d7397..b37b442 100644 (file)
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -1291,7 +1291,7 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
     return ed;
   }
 
-  private static int[] getStartEnd(int[] aligmentStartEnd,
+  public static int[] getStartEnd(int[] aligmentStartEnd,
           List<int[]> hiddenCols)
   {
     int startPos = aligmentStartEnd[0];
@@ -1303,7 +1303,6 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener,
     for (int[] hiddenCol : hiddenCols)
     {
       // System.out.println("comparing : " + hiddenCol[0] + "-" + hiddenCol[1]);
-
       lowestRange = (hiddenCol[0] <= startPos) ? hiddenCol : lowestRange;
       higestRange = (hiddenCol[1] >= endPos) ? hiddenCol : higestRange;
     }