REload from URL

[jalview.git] / src / jalview / gui / AlignFrame.java

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index 9e0bae6..be46dfa 100755 (executable)
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -563,7 +563,7 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener
       else
       {
         viewport.alignment.deleteAllGroups();
-        viewport.sequenceColours.clear();
+        viewport.sequenceColours=null;
         while (viewport.alignment.getHeight() > 0)
         {
           viewport.alignment.deleteSequence(0);
@@ -583,7 +583,8 @@ public class AlignFrame extends GAlignFrame implements DropTargetListener
       }
 
       FileLoader loader = new FileLoader();
-      loader.LoadFile(viewport, fileName, "File", currentFileFormat);
+      String protocol = fileName.startsWith("http:")? "URL":"File";
+      loader.LoadFile(viewport, fileName, protocol, currentFileFormat);
 
     }
   }