Hide apply and undo buttons

[jalview.git] / src / jalview / gui / AlignFrame.java

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index ec75ee5..c0216aa 100755 (executable)
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -280,7 +280,7 @@ public class AlignFrame extends GAlignFrame
       current = viewport.getAlignment().getSequenceAt(i);\r
       jSize = current.getLength();\r
       for (int j=0; j < jSize; j++)\r
-        if (current.getCharAt(j)=='-' || current.getCharAt(j)=='.' || current.getCharAt(j)==' ')\r
+        if(jalview.util.Comparison.isGap(current.getCharAt(i)))\r
         {\r
           current.deleteCharAt(j);\r
           j--;\r
@@ -521,6 +521,7 @@ public class AlignFrame extends GAlignFrame
       frame.setContentPane(sp);\r
       Desktop.addInternalFrame(frame, "Conservation Colour Increment", 400, 90);\r
       frame.setMaximizable(false);\r
+      frame.setResizable(false);\r
     }\r
   }\r
 \r
@@ -535,6 +536,7 @@ public class AlignFrame extends GAlignFrame
       frame.setContentPane(sp);\r
       Desktop.addInternalFrame(frame, "Percentage Identity Threshold", 400, 90);\r
       frame.setMaximizable(false);\r
+      frame.setResizable(false);\r
     }\r
   }\r
 \r
@@ -606,6 +608,12 @@ public class AlignFrame extends GAlignFrame
 \r
   public void removeRedundancyMenuItem_actionPerformed(ActionEvent e)\r
   {\r
+    RedundancyPanel sp = new RedundancyPanel(alignPanel);\r
+    JInternalFrame frame = new JInternalFrame();\r
+    frame.setContentPane(sp);\r
+    Desktop.addInternalFrame(frame, "Redundancy threshold selection", 400, 100);\r
+    frame.setMaximizable(false);\r
+    frame.setResizable(false);\r
 \r
   }\r
 \r