JAL-2668 add tests for HMMER commands, annotation and io

[jalview.git] / src / jalview / gui / AlignViewport.java

diff --git a/src/jalview/gui/AlignViewport.java b/src/jalview/gui/AlignViewport.java
index f4ded5b..3be48d6 100644 (file)
--- a/src/jalview/gui/AlignViewport.java
+++ b/src/jalview/gui/AlignViewport.java
@@ -37,7 +37,6 @@ import jalview.datamodel.AlignmentI;
 import jalview.datamodel.ColumnSelection;
 import jalview.datamodel.HiddenColumns;
 import jalview.datamodel.PDBEntry;
-import jalview.datamodel.ProfilesI;
 import jalview.datamodel.SearchResults;
 import jalview.datamodel.SearchResultsI;
 import jalview.datamodel.Sequence;
@@ -286,6 +285,8 @@ public class AlignViewport extends AlignmentViewport implements
       showOccupancy = Cache.getDefault(Preferences.SHOW_OCCUPANCY, true);
     }
     initAutoAnnotation();
+    initInformation();
+
     String colourProperty = alignment.isNucleotide() ? Preferences.DEFAULT_COLOUR_NUC
             : Preferences.DEFAULT_COLOUR_PROT;
     String schemeName = Cache.getProperty(colourProperty);
@@ -1162,17 +1163,6 @@ public class AlignViewport extends AlignmentViewport implements
     return normaliseHMMSequenceLogo;
   }
 
-  @Override
-  public ProfilesI getSequenceInformationHash()
-  {
-    return hinformation;
-  }
-
-  @Override
-  public void setSequenceInformationHash(ProfilesI hinformation)
-  {
-    this.hinformation = hinformation;
 
-  }
 
 }