Merge branch 'develop' into features/JAL-2446NCList

[jalview.git] / src / jalview / gui / AlignmentPanel.java

diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index f3e2733..7f1ce31 100644 (file)
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -417,7 +417,8 @@ public class AlignmentPanel extends GAlignmentPanel implements
        */
       if (centre)
       {
-        int offset = (vpRanges.getEndRes() - vpRanges.getStartRes() + 1) / 2 - 1;
+        int offset = (vpRanges.getEndRes() - vpRanges.getStartRes() + 1) / 2
+                - 1;
         start = Math.max(start - offset, 0);
         end = end + offset - 1;
       }
@@ -1507,8 +1508,8 @@ public class AlignmentPanel extends GAlignmentPanel implements
             }
             if (!Comparison.isGap(seq.getCharAt(res)))
             {
-              List<SequenceFeature> features = seq.getFeatures()
-                      .findFeatures(seqPos, seqPos);
+              List<SequenceFeature> features = seq.findFeatures(seqPos,
+                      seqPos);
               for (SequenceFeature sf : features)
               {
                 if (sf.isContactFeature())