JAL-2778 added setopaque again, and super.paintComponent(s)

[jalview.git] / src / jalview / gui / AnnotationPanel.java

diff --git a/src/jalview/gui/AnnotationPanel.java b/src/jalview/gui/AnnotationPanel.java
index be8f5f6..48e0483 100755 (executable)
--- a/src/jalview/gui/AnnotationPanel.java
+++ b/src/jalview/gui/AnnotationPanel.java
@@ -670,7 +670,7 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
       }
       graphStretchY = evt.getY();
       adjustPanelHeight();
-      ap.paintAlignment(true);
+      ap.paintAlignment(false, false);
     }
     else
     {
@@ -904,6 +904,8 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
   @Override
   public void paintComponent(Graphics g)
   {
+    super.paintComponent(g);
+
     g.setColor(Color.white);
     g.fillRect(0, 0, getWidth(), getHeight());
 
@@ -1185,5 +1187,10 @@ public class AnnotationPanel extends JPanel implements AwtRenderPanelI,
     {
       fastPaint((int) evt.getNewValue() - (int) evt.getOldValue());
     }
+    else if (evt.getPropertyName().equals(ViewportRanges.STARTRESANDSEQ))
+    {
+      fastPaint(((int[]) evt.getNewValue())[0]
+              - ((int[]) evt.getOldValue())[0]);
+    }
   }
 }