Highlight from alignment

[jalview.git] / src / jalview / gui / AnnotationPanel.java

diff --git a/src/jalview/gui/AnnotationPanel.java b/src/jalview/gui/AnnotationPanel.java
index 15bc284..d97c80f 100755 (executable)
--- a/src/jalview/gui/AnnotationPanel.java
+++ b/src/jalview/gui/AnnotationPanel.java
@@ -76,6 +76,12 @@ public class AnnotationPanel extends JPanel implements MouseListener,
         ap.annotationScroller.getVerticalScrollBar().addAdjustmentListener(this);\r
     }\r
 \r
+    public AnnotationPanel(AlignViewport av)\r
+    {\r
+      this.av = av;\r
+    }\r
+\r
+\r
     /**\r
      * DOCUMENT ME!\r
      *\r
@@ -89,7 +95,7 @@ public class AnnotationPanel extends JPanel implements MouseListener,
     /**\r
      * DOCUMENT ME!\r
      */\r
-    public void adjustPanelHeight()\r
+    public int adjustPanelHeight()\r
     {\r
         // setHeight of panels\r
         image = null;\r
@@ -136,6 +142,8 @@ public class AnnotationPanel extends JPanel implements MouseListener,
         }\r
 \r
         this.setPreferredSize(new Dimension(1, height));\r
+\r
+        return height;\r
     }\r
 \r
     /**\r
@@ -606,10 +614,13 @@ public class AnnotationPanel extends JPanel implements MouseListener,
      * @param startRes DOCUMENT ME!\r
      * @param endRes DOCUMENT ME!\r
      */\r
-    public void drawComponent(Graphics2D g, int startRes, int endRes)\r
+    public void drawComponent(Graphics g, int startRes, int endRes)\r
     {\r
-               if(fm==null)\r
-                       fm = g.getFontMetrics();\r
+      g.setFont(av.getFont());\r
+\r
+      if (fm == null)\r
+        fm = g.getFontMetrics();\r
+\r
 \r
         g.setColor(Color.white);\r
         g.fillRect(0, 0, (endRes - startRes) * av.charWidth, getHeight());\r