{
// just transfer the file name from the first sequence's first
// PDBEntry
- jmb.pdbentry[pi].setFile(file = ((PDBEntry) pdbseq
- .getSequenceAt(0).getPDBId().elementAt(0)).getFile());
+ file = new File(((PDBEntry) pdbseq
+ .getSequenceAt(0).getPDBId().elementAt(0)).getFile()).toURI().getPath().substring(1);
+ jmb.pdbentry[pi].setFile(file);
- files.append(" \"" + jalview.util.Platform.escapeString(file) + "\"");
+ files.append(" \"" + file + "\"");
}
else
{
}
if (file != null)
{
- files.append(" \"" + jalview.util.Platform.escapeString(file) + "\"");
+ files.append(" \"" + file + "\"");
}
}
}