initVarna(this.DEFAULT_SEQUENCE,this.DEFAULT_STRUCTURE1);
}
- public AppVarnaBinding(String seq){
+ public AppVarnaBinding(String seq, String struc){
super("VARNA in Jalview");
- initVarna(seq,this.DEFAULT_STRUCTURE1);
+ initVarna(seq,struc);
}
private void initVarna(String seq, String str){
DefaultListModel dlm = new DefaultListModel();
-
DefaultListSelectionModel m = new DefaultListSelectionModel();
m.setSelectionMode(ListSelectionModel.SINGLE_SELECTION);
m.setLeadAnchorNotificationEnabled(false);
-
- _sideList = new ReorderableJList();
+ _sideList = new ReorderableJList();
_sideList.setModel(dlm);
_sideList.addMouseListener(this);
_sideList.setSelectionModel(m);