_alignwith = new Vector<AlignmentPanel>();
}
- // no colour by chain command in Chimera?
- chainColour.setVisible(false);
-
// save As not yet implemented
savemenu.setVisible(false);
// TODO : Fix multiple seq to one chain issue here.
ap.getStructureSelectionManager().setMapping(seq, chains,
alreadyMapped, AppletFormatAdapter.FILE);
- if (ap.seqPanel.seqCanvas.fr != null)
+ if (ap.getSeqPanel().seqCanvas.fr != null)
{
- ap.seqPanel.seqCanvas.fr.featuresAdded();
+ ap.getSeqPanel().seqCanvas.fr.featuresAdded();
ap.paintAlignment(true);
}
{
if (progressBar != null)
{
- progressBar.setProgressBar(
- MessageManager.getString("label.state_completed"), hdl);
+ progressBar
+ .setProgressBar(
+ pdbid
+ + " "
+ + MessageManager
+ .getString("label.state_completed"),
+ hdl);
}
}
/*