j2sNative references moved to Platform
[jalview.git] / src / jalview / gui / Desktop.java
index 855ccbc..1554079 100644 (file)
@@ -46,7 +46,6 @@ import jalview.util.ImageMaker.TYPE;
 import jalview.util.MessageManager;
 import jalview.util.Platform;
 import jalview.util.UrlConstants;
-import jalview.util.dialogrunner.RunResponse;
 import jalview.viewmodel.AlignmentViewport;
 import jalview.ws.params.ParamManager;
 import jalview.ws.utils.UrlDownloadClient;
@@ -89,7 +88,6 @@ import java.util.ArrayList;
 import java.util.Hashtable;
 import java.util.List;
 import java.util.ListIterator;
-import java.util.StringTokenizer;
 import java.util.Vector;
 import java.util.concurrent.ExecutorService;
 import java.util.concurrent.Executors;
@@ -346,12 +344,13 @@ public class Desktop extends jalview.jbgui.GDesktop
    */
   public Desktop()
   {
+         super();
     /**
      * A note to implementors. It is ESSENTIAL that any activities that might block
      * are spawned off as threads rather than waited for during this constructor.
      */
     instance = this;
-    if (!Jalview.isJS())
+    if (!Platform.isJS())
     {
       doVamsasClientCheck();
     }
@@ -364,6 +363,8 @@ public class Desktop extends jalview.jbgui.GDesktop
     boolean showjconsole = jalview.bin.Cache.getDefault("SHOW_JAVA_CONSOLE",
             false);
     desktop = new MyDesktopPane(selmemusage);
+    
+    
     showMemusage.setSelected(selmemusage);
     desktop.setBackground(Color.white);
     getContentPane().setLayout(new BorderLayout());
@@ -371,14 +372,21 @@ public class Desktop extends jalview.jbgui.GDesktop
     // JScrollPane sp = new JScrollPane();
     // sp.getViewport().setView(desktop);
     // getContentPane().add(sp, BorderLayout.CENTER);
+    
+    // BH 2018 - just an experiment to try unclipped JInternalFrames. 
+       if (Platform.isJS()) 
+       {
+         getRootPane().putClientProperty("swingjs.overflow.hidden", "false");
+       }
+    
     getContentPane().add(desktop, BorderLayout.CENTER);
     desktop.setDragMode(JDesktopPane.OUTLINE_DRAG_MODE);
-
+    
     // This line prevents Windows Look&Feel resizing all new windows to maximum
     // if previous window was maximised
     desktop.setDesktopManager(new MyDesktopManager(
-            (Platform.isWindows() ? new DefaultDesktopManager()
-                    : Platform.isAMac()
+            (Platform.isWindowsAndNotJS() ? new DefaultDesktopManager()
+                    : Platform.isAMacAndNotJS()
                             ? new AquaInternalFrameManager(
                                     desktop.getDesktopManager())
                             : desktop.getDesktopManager())));
@@ -396,7 +404,7 @@ public class Desktop extends jalview.jbgui.GDesktop
       setBounds(xPos, yPos, 900, 650);
     }
     
-    boolean doFullLoad = /** @j2sNative ! */true;
+    boolean doFullLoad = !Platform.isJS();
     
     if (doFullLoad) {
       
@@ -874,8 +882,7 @@ public class Desktop extends jalview.jbgui.GDesktop
     frame.setResizable(resizable);
     frame.setMaximizable(resizable);
     frame.setIconifiable(resizable);
-    frame.setOpaque(/** @j2sNative true || */
-            false);
+    frame.setOpaque(Platform.isJS()); // BH this should not be necessary
 
     if (frame.getX() < 1 && frame.getY() < 1)
     {
@@ -1113,9 +1120,8 @@ public class Desktop extends jalview.jbgui.GDesktop
             MessageManager.getString("label.open_local_file"));
     chooser.setToolTipText(MessageManager.getString("action.open"));
 
-    chooser.response(new RunResponse(JalviewFileChooser.APPROVE_OPTION)
+    chooser.setResponseHandler(0, new Runnable()
     {
-
       @Override
       public void run()
       {
@@ -1144,7 +1150,8 @@ public class Desktop extends jalview.jbgui.GDesktop
         new FileLoader().LoadFile(viewport, selectedFile,
                 DataSourceType.FILE, format);
       }
-    }).openDialog(this);
+    });
+    chooser.showOpenDialog(this);
   }
 
   /**
@@ -1170,7 +1177,7 @@ public class Desktop extends jalview.jbgui.GDesktop
      */
     JComponent history;
     String urlBase = "http://www.";
-    if (Jalview.isJS())
+    if (Platform.isJS())
     {
       history = new JTextField(urlBase, 35);
     }
@@ -1194,11 +1201,11 @@ public class Desktop extends jalview.jbgui.GDesktop
 
     Object[] options = new Object[] { MessageManager.getString("action.ok"),
         MessageManager.getString("action.cancel") };
-    RunResponse action = new RunResponse(JvOptionPane.OK_OPTION) {
+    Runnable action = new Runnable() {
       @Override
       public void run()
       {
-        String url = Jalview.isJS() ? ((JTextField) history).getText()
+        String url = Platform.isJS() ? ((JTextField) history).getText()
                 : ((JComboBox<String>) history).getSelectedItem()
                         .toString();
 
@@ -1250,7 +1257,7 @@ public class Desktop extends jalview.jbgui.GDesktop
       }};
     String dialogOption = MessageManager
             .getString("label.input_alignment_from_url");
-    JvOptionPane.newOptionDialog(desktop).response(action)
+    JvOptionPane.newOptionDialog(desktop).setResponseHandler(0, action)
             .showInternalDialog(panel, dialogOption,
                     JvOptionPane.YES_NO_CANCEL_OPTION,
                     JvOptionPane.PLAIN_MESSAGE, null, options,
@@ -1423,7 +1430,7 @@ public class Desktop extends jalview.jbgui.GDesktop
   {
     try
     {
-      if (Jalview.isJS())
+      if (Platform.isJS())
       {
         BrowserLauncher.openURL("http://www.jalview.org/help.html");
       }
@@ -1649,13 +1656,10 @@ public class Desktop extends jalview.jbgui.GDesktop
 
     chooser.setFileView(new JalviewFileView());
     chooser.setDialogTitle(MessageManager.getString("label.save_state"));
-    // TODO: JAL-3048 Dialog runner refactoring here
-    int value = chooser.showSaveDialog(this);
-
-    if (value == JalviewFileChooser.APPROVE_OPTION)
+    int option = chooser.showSaveDialog(this);
+    if (option == JalviewFileChooser.APPROVE_OPTION)
     {
-      final Desktop me = this;
-      final java.io.File choice = chooser.getSelectedFile();
+      File choice = chooser.getSelectedFile();
       setProjectFile(choice);
 
       new Thread(new Runnable()
@@ -1691,7 +1695,7 @@ public class Desktop extends jalview.jbgui.GDesktop
             Cache.log.error(
                     "Problems whilst trying to save to " + choice.getName(),
                     ex);
-            JvOptionPane.showMessageDialog(me,
+            JvOptionPane.showMessageDialog(Desktop.this,
                     MessageManager.formatMessage(
                             "label.error_whilst_saving_current_state_to",
                             new Object[]
@@ -1702,10 +1706,10 @@ public class Desktop extends jalview.jbgui.GDesktop
           setProgressBar(null, choice.hashCode());
         }
       }).start();
-    }
+      }
   }
 
-  private void setProjectFile(File choice)
+  void setProjectFile(File choice)
   {
     this.projectFile = choice;
   }
@@ -1736,38 +1740,34 @@ public class Desktop extends jalview.jbgui.GDesktop
             "Jalview Project");
     chooser.setFileView(new JalviewFileView());
     chooser.setDialogTitle(MessageManager.getString("label.restore_state"));
-
-    int value = chooser.showOpenDialog(this);
-
-    if (value == JalviewFileChooser.APPROVE_OPTION)
+    chooser.setResponseHandler(0, new Runnable()
     {
-      final File selectedFile = chooser.getSelectedFile();
-      setProjectFile(selectedFile);
-      final String choice = selectedFile.getAbsolutePath();
-      Cache.setProperty("LAST_DIRECTORY", selectedFile.getParent());
-      new Thread(new Runnable()
+      @Override
+      public void run()
       {
-        @Override
-        public void run()
+        File selectedFile = chooser.getSelectedFile();
+        setProjectFile(selectedFile);
+        String choice = selectedFile.getAbsolutePath();
+        Cache.setProperty("LAST_DIRECTORY", selectedFile.getParent());
+        new Thread(new Runnable()
         {
-          setProgressBar(MessageManager.formatMessage(
-                  "label.loading_jalview_project", new Object[]
-                  { choice }), choice.hashCode());
-          try
+          @Override
+          public void run()
           {
-            if (asCastor)
-            {
-              new Jalview2XML().loadJalviewAlign(choice);
-            }
-            else
+               try {
+              if (asCastor)
+              {
+                new Jalview2XML().loadJalviewAlign(choice);
+              }
+              else
+              {
+                new jalview.project.Jalview2XML().loadJalviewAlign(selectedFile);
+              }
+            } catch (OutOfMemoryError oom)
             {
-              new jalview.project.Jalview2XML().loadJalviewAlign(choice);
-            }
-          } catch (OutOfMemoryError oom)
-          {
             new OOMWarning("Whilst loading project from " + choice, oom);
-          } catch (Exception ex)
-          {
+            } catch (Exception ex)
+            {
             Cache.log.error(
                     "Problems whilst loading project from " + choice, ex);
             JvOptionPane.showMessageDialog(Desktop.desktop,
@@ -1777,11 +1777,13 @@ public class Desktop extends jalview.jbgui.GDesktop
                             { choice }),
                     MessageManager.getString("label.couldnt_load_project"),
                     JvOptionPane.WARNING_MESSAGE);
+            }
           }
-          setProgressBar(null, choice.hashCode());
-        }
-      }).start();
-    }
+        }).start();
+      }
+    });
+    
+    chooser.showOpenDialog(this);
   }
 
   @Override
@@ -2084,7 +2086,7 @@ public class Desktop extends jalview.jbgui.GDesktop
   /**
    * import file into a new vamsas session (uses jalview.gui.VamsasApplication)
    * 
-   * @param file
+   * @param fileName
    * @return true if import was a success and a session was started.
    */
   public boolean vamsasImport(URL url)
@@ -3473,7 +3475,7 @@ public class Desktop extends jalview.jbgui.GDesktop
         }
         else
         {
-          if (Platform.isAMac())
+          if (Platform.isAMacAndNotJS())
           {
             System.err.println(
                     "Please ignore plist error - occurs due to problem with java 8 on OSX");
@@ -3590,8 +3592,7 @@ public class Desktop extends jalview.jbgui.GDesktop
         }
       }
     }
-    if (Platform.isWindows())
-
+    if (Platform.isWindowsAndNotJS())
     {
       Cache.log.debug("Scanning dropped content for Windows Link Files");