Merge branch 'JAL-1403' into develop

[jalview.git] / src / jalview / gui / FeatureSettings.java

diff --git a/src/jalview/gui/FeatureSettings.java b/src/jalview/gui/FeatureSettings.java
old mode 100755 (executable)
new mode 100644 (file)
index 35690a9..106ced9
--- a/src/jalview/gui/FeatureSettings.java
+++ b/src/jalview/gui/FeatureSettings.java
@@ -1,13 +1,13 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
+ * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
  * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- * 
+ *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
@@ -37,6 +37,7 @@ import jalview.datamodel.*;
 import jalview.io.*;
 import jalview.schemes.AnnotationColourGradient;
 import jalview.schemes.GraduatedColor;
+import jalview.util.MessageManager;
 import jalview.ws.dbsources.das.api.jalviewSourceI;
 
 public class FeatureSettings extends JPanel
@@ -315,8 +316,8 @@ public class FeatureSettings extends JPanel
     String group;
     for (int i = 0; i < af.getViewport().getAlignment().getHeight(); i++)
     {
-      if (af.getViewport().getAlignment().getSequenceAt(i).getDatasetSequence()
-              .getSequenceFeatures() == null)
+      if (af.getViewport().getAlignment().getSequenceAt(i)
+              .getDatasetSequence().getSequenceFeatures() == null)
       {
         continue;
       }
@@ -714,13 +715,13 @@ public class FeatureSettings extends JPanel
         PrintWriter out = new PrintWriter(new OutputStreamWriter(
                 new FileOutputStream(choice), "UTF-8"));
 
-        Enumeration e = fr.featureColours.keys();
+        Iterator e = fr.featureColours.keySet().iterator();
         float[] sortOrder = new float[fr.featureColours.size()];
         String[] sortTypes = new String[fr.featureColours.size()];
         int i = 0;
-        while (e.hasMoreElements())
+        while (e.hasNext())
         {
-          sortTypes[i] = e.nextElement().toString();
+          sortTypes[i] = e.next().toString();
           sortOrder[i] = fr.getOrder(sortTypes[i]);
           i++;
         }
@@ -905,7 +906,7 @@ public class FeatureSettings extends JPanel
     dasSettingsPane.setLayout(borderLayout3);
     bigPanel.setLayout(borderLayout4);
     invert.setFont(JvSwingUtils.getLabelFont());
-    invert.setText("Invert Selection");
+    invert.setText(MessageManager.getString("label.invert_selection"));
     invert.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -914,7 +915,7 @@ public class FeatureSettings extends JPanel
       }
     });
     optimizeOrder.setFont(JvSwingUtils.getLabelFont());
-    optimizeOrder.setText("Optimise Order");
+    optimizeOrder.setText(MessageManager.getString("label.optimise_order"));
     optimizeOrder.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -923,7 +924,7 @@ public class FeatureSettings extends JPanel
       }
     });
     sortByScore.setFont(JvSwingUtils.getLabelFont());
-    sortByScore.setText("Seq sort by Score");
+    sortByScore.setText(MessageManager.getString("label.seq_sort_by_score"));
     sortByScore.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -941,7 +942,7 @@ public class FeatureSettings extends JPanel
       }
     });
     cancel.setFont(JvSwingUtils.getLabelFont());
-    cancel.setText("Cancel");
+    cancel.setText(MessageManager.getString("action.cancel"));
     cancel.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -951,7 +952,7 @@ public class FeatureSettings extends JPanel
       }
     });
     ok.setFont(JvSwingUtils.getLabelFont());
-    ok.setText("OK");
+    ok.setText(MessageManager.getString("action.ok"));
     ok.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -960,7 +961,7 @@ public class FeatureSettings extends JPanel
       }
     });
     loadColours.setFont(JvSwingUtils.getLabelFont());
-    loadColours.setText("Load Colours");
+    loadColours.setText(MessageManager.getString("label.load_colours"));
     loadColours.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -969,7 +970,7 @@ public class FeatureSettings extends JPanel
       }
     });
     saveColours.setFont(JvSwingUtils.getLabelFont());
-    saveColours.setText("Save Colours");
+    saveColours.setText(MessageManager.getString("label.save_colours"));
     saveColours.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -987,7 +988,7 @@ public class FeatureSettings extends JPanel
     });
 
     transparency.setMaximum(70);
-    fetchDAS.setText("Fetch DAS Features");
+    fetchDAS.setText(MessageManager.getString("label.fetch_das_features"));
     fetchDAS.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -995,7 +996,7 @@ public class FeatureSettings extends JPanel
         fetchDAS_actionPerformed(e);
       }
     });
-    saveDAS.setText("Save as default");
+    saveDAS.setText(MessageManager.getString("action.save_as_default"));
     saveDAS.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -1006,7 +1007,7 @@ public class FeatureSettings extends JPanel
     dasButtonPanel.setBorder(BorderFactory.createEtchedBorder());
     dasSettingsPane.setBorder(null);
     cancelDAS.setEnabled(false);
-    cancelDAS.setText("Cancel Fetch");
+    cancelDAS.setText(MessageManager.getString("action.cancel_fetch"));
     cancelDAS.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
@@ -1134,13 +1135,13 @@ public class FeatureSettings extends JPanel
 
       if (fr.featureGroups != null)
       {
-        Enumeration en = fr.featureGroups.keys();
+        Iterator en = fr.featureGroups.keySet().iterator();
         gps = new String[fr.featureColours.size()];
         int g = 0;
         boolean valid = false;
-        while (en.hasMoreElements())
+        while (en.hasNext())
         {
-          String gp = (String) en.nextElement();
+          String gp = (String) en.next();
           Boolean on = (Boolean) fr.featureGroups.get(gp);
           if (on != null && on.booleanValue())
           {
@@ -1253,7 +1254,8 @@ public class FeatureSettings extends JPanel
   public void fetchDasFeatures(Vector sources, boolean block)
   {
     initDasSources();
-    List<jalviewSourceI> resolved = dassourceBrowser.sourceRegistry.resolveSourceNicknames(sources);
+    List<jalviewSourceI> resolved = dassourceBrowser.sourceRegistry
+            .resolveSourceNicknames(sources);
     if (resolved.size() == 0)
     {
       resolved = dassourceBrowser.getSelectedSources();
@@ -1310,9 +1312,8 @@ public class FeatureSettings extends JPanel
   {
     complete();
     JOptionPane.showInternalConfirmDialog(Desktop.desktop,
-            "No das sources were selected.\n"
-                    + "Please select some sources and\n" + " try again.",
-            "No Sources Selected", JOptionPane.DEFAULT_OPTION,
+            MessageManager.getString("label.no_das_sources_selected_warn"),
+            MessageManager.getString("label.no_das_sources_selected_title"), JOptionPane.DEFAULT_OPTION,
             JOptionPane.INFORMATION_MESSAGE);
   }
 
@@ -1592,7 +1593,7 @@ class FeatureIcon implements Icon
       // width/g.getFontMetrics().stringWidth("Label"),
       // height/g.getFontMetrics().getHeight())));
 
-      g.drawString("Label", 0, 0);
+      g.drawString(MessageManager.getString("label.label"), 0, 0);
 
     }
     else