import javax.swing.JInternalFrame;
import javax.swing.JLayeredPane;
import javax.swing.KeyStroke;
+import javax.swing.event.InternalFrameEvent;
/**
* Performs the menu option for searching the alignment, for the next or all
frame = new JInternalFrame();
frame.setContentPane(this);
frame.setLayer(JLayeredPane.PALETTE_LAYER);
+ frame.addInternalFrameListener(
+ new javax.swing.event.InternalFrameAdapter()
+ {
+ @Override
+ public void internalFrameClosing(InternalFrameEvent e)
+ {
+ closeAction();
+ }
+ });
addEscapeHandler();
Desktop.addInternalFrame(frame, MessageManager.getString("label.find"),
MY_WIDTH, MY_HEIGHT);
frame.setMinimumSize(new Dimension(MIN_WIDTH, MIN_HEIGHT));
- textfield.requestFocus();
+ searchBox.requestFocus();
}
/**
*/
private void addEscapeHandler()
{
- getRootPane().getInputMap(JComponent.WHEN_IN_FOCUSED_WINDOW).put(
- KeyStroke.getKeyStroke(KeyEvent.VK_ESCAPE, 0), "Cancel");
+ getRootPane().getInputMap(JComponent.WHEN_IN_FOCUSED_WINDOW)
+ .put(KeyStroke.getKeyStroke(KeyEvent.VK_ESCAPE, 0), "Cancel");
getRootPane().getActionMap().put("Cancel", new AbstractAction()
{
@Override
public void actionPerformed(ActionEvent e)
{
- escapeActionPerformed();
+ closeAction();
}
});
}
/**
- * Close the panel on Escape key press
- */
- protected void escapeActionPerformed()
- {
- setVisible(false);
- frame.dispose();
- }
-
- /**
* Performs the 'Find Next' action.
*
* @param e
List<SequenceI> seqs = new ArrayList<SequenceI>();
List<SequenceFeature> features = new ArrayList<SequenceFeature>();
- String searchString = textfield.getText().trim();
+ String searchString = searchBox.getEditor().getItem().toString().trim();
String desc = "Search Results";
/*
for (SearchResultMatchI match : searchResults.getResults())
{
seqs.add(match.getSequence().getDatasetSequence());
- features.add(new SequenceFeature(searchString, desc, null, match
- .getStart(), match.getEnd(), desc));
+ features.add(new SequenceFeature(searchString, desc, match.getStart(),
+ match.getEnd(), desc));
}
- if (ap.getSeqPanel().seqCanvas.getFeatureRenderer().amendFeatures(seqs,
- features, true, ap, searchString))
+ new FeatureEditor(ap).createFeatures(seqs, features, new Runnable()
{
- /*
- * ensure feature display is turned on to show the new features,
- * and remove them as highlighted regions
- */
- ap.alignFrame.showSeqFeatures.setSelected(true);
- av.setShowSequenceFeatures(true);
- ap.highlightSearchResults(null);
- }
+ @Override
+ public void run()
+ {
+
+ /*
+ * ensure feature display is turned on to show the new features,
+ * and remove them as highlighted regions
+ */
+ ap.alignFrame.showSeqFeatures.setSelected(true);
+ av.setShowSequenceFeatures(true);
+ ap.highlightSearchResults(null);
+ }
+ });
}
/**
{
createFeatures.setEnabled(false);
- String searchString = textfield.getText().trim();
+ String searchString = searchBox.getUserInput().trim();
if (isInvalidSearchString(searchString))
{
searchResults = null;
}
+ searchBox.updateCache();
+
// if allResults is null, this effectively switches displaySearch flag in
// seqCanvas
ap.highlightSearchResults(searchResults);
// 'SelectRegion' selection
if (!haveResults)
{
+ resIndex = -1;
+ seqIndex = 0;
JvOptionPane.showInternalMessageDialog(this,
MessageManager.getString("label.finished_searching"), null,
JvOptionPane.INFORMATION_MESSAGE);
- resIndex = -1;
- seqIndex = 0;
}
else
{
if (doFindAll)
{
// then we report the matches that were found
- String message = (idMatch.size() > 0) ? "" + idMatch.size()
- + " IDs" : "";
+ String message = (idMatch.size() > 0) ? "" + idMatch.size() + " IDs"
+ : "";
if (searchResults != null)
{
if (idMatch.size() > 0 && searchResults.getSize() > 0)
message += searchResults.getSize()
+ " subsequence matches found.";
}
- JvOptionPane.showInternalMessageDialog(this, message, null,
- JvOptionPane.INFORMATION_MESSAGE);
resIndex = -1;
seqIndex = 0;
+ JvOptionPane.showInternalMessageDialog(this, message, null,
+ JvOptionPane.INFORMATION_MESSAGE);
}
}
-
}
/**
}
return error;
}
+
+ protected void closeAction()
+ {
+ frame.setVisible(false);
+ frame.dispose();
+ searchBox.persistCache();
+ if (getFocusedViewport())
+ {
+ ap.alignFrame.requestFocus();
+ }
+ }
}