}\r
catch(java.net.UnknownHostException ex)\r
{\r
+ if (Desktop.instance != null)\r
+ Desktop.instance.stopLoading();\r
+\r
ex.printStackTrace();\r
System.err.println("Couldn't locate Jalview XML file : " +\r
ex + "\n");\r
}\r
catch (Exception ex)\r
{\r
+ if (Desktop.instance != null)\r
+ Desktop.instance.stopLoading();\r
+\r
//Is Version 1 Jar file?\r
af = new Jalview2XML_V1().LoadJalviewAlign(file);\r
\r