boolean for internal copies

[jalview.git] / src / jalview / gui / Jalview2XML_V1.java

diff --git a/src/jalview/gui/Jalview2XML_V1.java b/src/jalview/gui/Jalview2XML_V1.java
index b347864..393b192 100755 (executable)
--- a/src/jalview/gui/Jalview2XML_V1.java
+++ b/src/jalview/gui/Jalview2XML_V1.java
@@ -20,8 +20,6 @@ package jalview.gui;
 \r
 import jalview.schemes.*;\r
 \r
-import jalview.gui.*;\r
-\r
 import java.io.*;\r
 \r
 import java.net.*;\r
@@ -340,7 +338,7 @@ public class Jalview2XML_V1
                 if (groups[i].getConsThreshold() != 0)\r
                 {\r
                     jalview.analysis.Conservation c = new jalview.analysis.Conservation("All",\r
-                            ResidueProperties.propHash, 3, sg.getSequences(false), 0,\r
+                            ResidueProperties.propHash, 3, sg.getSequences(null), 0,\r
                             sg.getWidth() - 1);\r
                     c.calculate();\r
                     c.verdict(false, 25);\r