/*\r
* Jalview - A Sequence Alignment Editor and Viewer\r
- * Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
*\r
* This program is free software; you can redistribute it and/or\r
* modify it under the terms of the GNU General Public License\r
import java.awt.*;\r
import java.awt.event.*;\r
import java.awt.image.*;\r
-\r
import javax.swing.*;\r
\r
-\r
/**\r
* DOCUMENT ME!\r
*\r
* @author $author$\r
* @version $Revision$\r
*/\r
-public class OverviewPanel extends JPanel implements Runnable\r
+public class OverviewPanel\r
+ extends JPanel implements Runnable\r
{\r
- BufferedImage miniMe;\r
- AlignViewport av;\r
- AlignmentPanel ap;\r
- float scalew = 1f;\r
- float scaleh = 1f;\r
- int width;\r
- int sequencesHeight;\r
- int graphHeight = 20;\r
- int boxX = -1;\r
- int boxY = -1;\r
- int boxWidth = -1;\r
- int boxHeight = -1;\r
- boolean resizing = false;\r
-\r
- // Can set different properties in this seqCanvas than\r
- // main visible SeqCanvas\r
- SequenceRenderer sr;\r
- FeatureRenderer fr;\r
-\r
- /**\r
- * Creates a new OverviewPanel object.\r
- *\r
- * @param ap DOCUMENT ME!\r
- */\r
- public OverviewPanel(AlignmentPanel ap)\r
+ BufferedImage miniMe;\r
+ AlignViewport av;\r
+ AlignmentPanel ap;\r
+ float scalew = 1f;\r
+ float scaleh = 1f;\r
+ int width;\r
+ int sequencesHeight;\r
+ int graphHeight = 20;\r
+ int boxX = -1;\r
+ int boxY = -1;\r
+ int boxWidth = -1;\r
+ int boxHeight = -1;\r
+ boolean resizing = false;\r
+\r
+ // Can set different properties in this seqCanvas than\r
+ // main visible SeqCanvas\r
+ SequenceRenderer sr;\r
+ FeatureRenderer fr;\r
+\r
+ /**\r
+ * Creates a new OverviewPanel object.\r
+ *\r
+ * @param ap DOCUMENT ME!\r
+ */\r
+ public OverviewPanel(AlignmentPanel ap)\r
+ {\r
+ this.av = ap.av;\r
+ this.ap = ap;\r
+ setLayout(null);\r
+\r
+ sr = new SequenceRenderer(av);\r
+ sr.renderGaps = false;\r
+ sr.forOverview = true;\r
+ fr = new FeatureRenderer(av);\r
+\r
+ // scale the initial size of overviewpanel to shape of alignment\r
+ float initialScale = (float) av.alignment.getWidth() /\r
+ (float) av.alignment.getHeight();\r
+\r
+ if (av.conservation == null)\r
{\r
- this.av = ap.av;\r
- this.ap = ap;\r
- setLayout(null);\r
-\r
- sr = new SequenceRenderer(av);\r
- sr.renderGaps = false;\r
- sr.forOverview = true;\r
- fr = new FeatureRenderer(av);\r
-\r
- // scale the initial size of overviewpanel to shape of alignment\r
- float initialScale = (float) av.alignment.getWidth() / (float) av.alignment.getHeight();\r
-\r
- if(av.conservation==null)\r
- graphHeight = 0;\r
-\r
-\r
- if (av.alignment.getWidth() > av.alignment.getHeight())\r
- {\r
- // wider\r
- width = 400;\r
- sequencesHeight = (int) (400f / initialScale);\r
- if(sequencesHeight<40)\r
- sequencesHeight = 40;\r
- }\r
- else\r
- {\r
- // taller\r
- width = (int) (400f * initialScale);\r
- sequencesHeight = 300;\r
-\r
- if (width < 120)\r
- {\r
- width = 120;\r
- }\r
- }\r
-\r
- addComponentListener(new ComponentAdapter()\r
- {\r
- public void componentResized(ComponentEvent evt)\r
- {\r
- if ((getWidth() != width) ||\r
- (getHeight() != (sequencesHeight + graphHeight)))\r
- {\r
- updateOverviewImage();\r
- }\r
- }\r
- });\r
-\r
- addMouseMotionListener(new MouseMotionAdapter()\r
- {\r
- public void mouseDragged(MouseEvent evt)\r
- {\r
- if (!av.wrapAlignment)\r
- {\r
- boxX = evt.getX();\r
- boxY = evt.getY();\r
- checkValid();\r
- }\r
- }\r
- });\r
-\r
- addMouseListener(new MouseAdapter()\r
- {\r
- public void mousePressed(MouseEvent evt)\r
- {\r
- if(!av.wrapAlignment)\r
- {\r
- boxX = evt.getX();\r
- boxY = evt.getY();\r
- checkValid();\r
- }\r
- }\r
- });\r
-\r
- updateOverviewImage();\r
+ graphHeight = 0;\r
}\r
\r
-\r
- /**\r
- * DOCUMENT ME!\r
- */\r
- void checkValid()\r
+ if (av.alignment.getWidth() > av.alignment.getHeight())\r
{\r
- if (boxY < 0)\r
- {\r
- boxY = 0;\r
- }\r
+ // wider\r
+ width = 400;\r
+ sequencesHeight = (int) (400f / initialScale);\r
+ if (sequencesHeight < 40)\r
+ {\r
+ sequencesHeight = 40;\r
+ }\r
+ }\r
+ else\r
+ {\r
+ // taller\r
+ width = (int) (400f * initialScale);\r
+ sequencesHeight = 300;\r
\r
- if (boxY > (sequencesHeight - boxHeight))\r
- {\r
- boxY = sequencesHeight - boxHeight + 1;\r
- }\r
+ if (width < 120)\r
+ {\r
+ width = 120;\r
+ }\r
+ }\r
\r
- if (boxX < 0)\r
+ addComponentListener(new ComponentAdapter()\r
+ {\r
+ public void componentResized(ComponentEvent evt)\r
+ {\r
+ if ( (getWidth() != width) ||\r
+ (getHeight() != (sequencesHeight + graphHeight)))\r
{\r
- boxX = 0;\r
+ updateOverviewImage();\r
}\r
+ }\r
+ });\r
\r
- if (boxX > (width - boxWidth))\r
+ addMouseMotionListener(new MouseMotionAdapter()\r
+ {\r
+ public void mouseDragged(MouseEvent evt)\r
+ {\r
+ if (!av.wrapAlignment)\r
{\r
- if(av.hasHiddenColumns)\r
- {\r
- //Try smallest possible box\r
- boxWidth = (int) ( (av.endRes - av.startRes + 1) *\r
- av.getCharWidth() * scalew);\r
- }\r
- boxX = width - boxWidth;\r
+ boxX = evt.getX();\r
+ boxY = evt.getY();\r
+ checkValid();\r
}\r
+ }\r
+ });\r
\r
- int col = (int) (boxX / scalew / av.getCharWidth());\r
- int row = (int) (boxY / scaleh / av.getCharHeight());\r
-\r
- if (av.hasHiddenColumns)\r
+ addMouseListener(new MouseAdapter()\r
+ {\r
+ public void mousePressed(MouseEvent evt)\r
+ {\r
+ if (!av.wrapAlignment)\r
{\r
- if (!av.getColumnSelection().isVisible(col))\r
- {\r
- return;\r
- }\r
-\r
- col = av.getColumnSelection().findColumnPosition(col);\r
+ boxX = evt.getX();\r
+ boxY = evt.getY();\r
+ checkValid();\r
}\r
+ }\r
+ });\r
\r
- if( av.hasHiddenRows )\r
- {\r
- row = av.alignment.getHiddenSequences().findIndexWithoutHiddenSeqs(row);\r
- }\r
+ updateOverviewImage();\r
+ }\r
\r
- ap.setScrollValues( col, row );\r
+ /**\r
+ * DOCUMENT ME!\r
+ */\r
+ void checkValid()\r
+ {\r
+ if (boxY < 0)\r
+ {\r
+ boxY = 0;\r
+ }\r
\r
+ if (boxY > (sequencesHeight - boxHeight))\r
+ {\r
+ boxY = sequencesHeight - boxHeight + 1;\r
}\r
\r
- /**\r
- * DOCUMENT ME!\r
- */\r
- public void updateOverviewImage()\r
+ if (boxX < 0)\r
{\r
- if (resizing)\r
- {\r
- resizeAgain = true;\r
- return;\r
- }\r
+ boxX = 0;\r
+ }\r
\r
- resizing = true;\r
+ if (boxX > (width - boxWidth))\r
+ {\r
+ if (av.hasHiddenColumns)\r
+ {\r
+ //Try smallest possible box\r
+ boxWidth = (int) ( (av.endRes - av.startRes + 1) *\r
+ av.getCharWidth() * scalew);\r
+ }\r
+ boxX = width - boxWidth;\r
+ }\r
\r
- if ( (getWidth() > 0) && (getHeight() > 0))\r
- {\r
- width = getWidth();\r
- sequencesHeight = getHeight() - graphHeight;\r
- }\r
+ int col = (int) (boxX / scalew / av.getCharWidth());\r
+ int row = (int) (boxY / scaleh / av.getCharHeight());\r
\r
- setPreferredSize(new Dimension(width, sequencesHeight + graphHeight));\r
+ if (av.hasHiddenColumns)\r
+ {\r
+ if (!av.getColumnSelection().isVisible(col))\r
+ {\r
+ return;\r
+ }\r
\r
- Thread thread = new Thread(this);\r
- thread.start();\r
- repaint();\r
+ col = av.getColumnSelection().findColumnPosition(col);\r
}\r
\r
- // This is set true if the user resizes whilst\r
- // the overview is being calculated\r
- boolean resizeAgain = false;\r
-\r
- /**\r
- * DOCUMENT ME!\r
- */\r
- public void run()\r
+ if (av.hasHiddenRows)\r
{\r
- miniMe = null;\r
+ row = av.alignment.getHiddenSequences().findIndexWithoutHiddenSeqs(row);\r
+ }\r
\r
- if (av.showSequenceFeatures)\r
- {\r
- fr.transferSettings( ap.seqPanel.seqCanvas.getFeatureRenderer() );\r
- }\r
+ ap.setScrollValues(col, row);\r
\r
- int alwidth = av.alignment.getWidth();\r
- int alheight = av.alignment.getHeight()\r
- +av.alignment.getHiddenSequences().getSize();\r
+ }\r
\r
- setPreferredSize(new Dimension(width, sequencesHeight + graphHeight));\r
+ /**\r
+ * DOCUMENT ME!\r
+ */\r
+ public void updateOverviewImage()\r
+ {\r
+ if (resizing)\r
+ {\r
+ resizeAgain = true;\r
+ return;\r
+ }\r
\r
- int fullsizeWidth = alwidth * av.getCharWidth();\r
- int fullsizeHeight = alheight * av.getCharHeight();\r
+ resizing = true;\r
\r
- scalew = (float) width / (float) fullsizeWidth;\r
- scaleh = (float) sequencesHeight / (float) fullsizeHeight;\r
+ if ( (getWidth() > 0) && (getHeight() > 0))\r
+ {\r
+ width = getWidth();\r
+ sequencesHeight = getHeight() - graphHeight;\r
+ }\r
\r
- miniMe = new BufferedImage(width, sequencesHeight + graphHeight,\r
- BufferedImage.TYPE_INT_RGB);\r
+ setPreferredSize(new Dimension(width, sequencesHeight + graphHeight));\r
\r
+ Thread thread = new Thread(this);\r
+ thread.start();\r
+ repaint();\r
+ }\r
\r
- Graphics mg = miniMe.getGraphics();\r
- mg.setColor(Color.orange);\r
- mg.fillRect(0,0,width, miniMe.getHeight());\r
+ // This is set true if the user resizes whilst\r
+ // the overview is being calculated\r
+ boolean resizeAgain = false;\r
\r
- float sampleCol = (float) alwidth / (float) width;\r
- float sampleRow = (float) alheight / (float) sequencesHeight;\r
+ /**\r
+ * DOCUMENT ME!\r
+ */\r
+ public void run()\r
+ {\r
+ miniMe = null;\r
\r
- int lastcol=-1, lastrow=-1;\r
- int color = Color.white.getRGB();\r
- int row, col;\r
- jalview.datamodel.SequenceI seq;\r
- boolean hiddenRow = false;\r
- for (row = 0; row < sequencesHeight; row++)\r
- {\r
- if((int)(row*sampleRow)==lastrow)\r
- {\r
- //No need to recalculate the colours,\r
- //Just copy from the row above\r
- for (col = 0; col < width; col++)\r
- {\r
- miniMe.setRGB(col, row, miniMe.getRGB(col, row-1));\r
- }\r
- continue;\r
- }\r
+ if (av.showSequenceFeatures)\r
+ {\r
+ fr.transferSettings(ap.seqPanel.seqCanvas.getFeatureRenderer());\r
+ }\r
\r
- lastrow = (int)(row*sampleRow);\r
+ int alwidth = av.alignment.getWidth();\r
+ int alheight = av.alignment.getHeight()\r
+ + av.alignment.getHiddenSequences().getSize();\r
\r
- hiddenRow = false;\r
- if (av.hasHiddenRows)\r
- {\r
- seq = av.alignment.getHiddenSequences().getHiddenSequence(lastrow);\r
- if (seq == null)\r
- {\r
- int index =\r
- av.alignment.getHiddenSequences().findIndexWithoutHiddenSeqs(lastrow);\r
-\r
- seq = av.alignment.getSequenceAt(index);\r
- }\r
- else\r
- {\r
- hiddenRow = true;\r
- }\r
- }\r
- else\r
- seq = av.alignment.getSequenceAt(lastrow);\r
+ setPreferredSize(new Dimension(width, sequencesHeight + graphHeight));\r
\r
- if(seq==null)\r
- {\r
- System.out.println(lastrow+" null");\r
- continue;\r
- }\r
+ int fullsizeWidth = alwidth * av.getCharWidth();\r
+ int fullsizeHeight = alheight * av.getCharHeight();\r
\r
- for (col = 0; col < width; col++)\r
- {\r
- if((int)(col*sampleCol) == lastcol && (int)(row*sampleRow)==lastrow)\r
- {\r
- miniMe.setRGB(col,row,color);\r
- continue;\r
- }\r
+ scalew = (float) width / (float) fullsizeWidth;\r
+ scaleh = (float) sequencesHeight / (float) fullsizeHeight;\r
\r
+ miniMe = new BufferedImage(width, sequencesHeight + graphHeight,\r
+ BufferedImage.TYPE_INT_RGB);\r
\r
- lastcol = (int)(col*sampleCol);\r
+ Graphics mg = miniMe.getGraphics();\r
+ mg.setColor(Color.orange);\r
+ mg.fillRect(0, 0, width, miniMe.getHeight());\r
\r
- if (seq.getLength() > lastcol)\r
- {\r
- color = sr.getResidueBoxColour(\r
- seq, lastcol).getRGB();\r
+ float sampleCol = (float) alwidth / (float) width;\r
+ float sampleRow = (float) alheight / (float) sequencesHeight;\r
\r
- if (av.showSequenceFeatures)\r
- color = fr.findFeatureColour(color, seq, lastcol);\r
- }\r
- else\r
- {\r
- color = -1; //White\r
- }\r
+ int lastcol = -1, lastrow = -1;\r
+ int color = Color.white.getRGB();\r
+ int row, col;\r
+ jalview.datamodel.SequenceI seq;\r
+ boolean hiddenRow = false;\r
+ for (row = 0; row < sequencesHeight; row++)\r
+ {\r
+ if ( (int) (row * sampleRow) == lastrow)\r
+ {\r
+ //No need to recalculate the colours,\r
+ //Just copy from the row above\r
+ for (col = 0; col < width; col++)\r
+ {\r
+ miniMe.setRGB(col, row, miniMe.getRGB(col, row - 1));\r
+ }\r
+ continue;\r
+ }\r
\r
- if(hiddenRow ||\r
- (av.hasHiddenColumns && !av.getColumnSelection().isVisible(lastcol)))\r
- {\r
- color = new Color(color).darker().darker().getRGB();\r
- }\r
+ lastrow = (int) (row * sampleRow);\r
\r
+ hiddenRow = false;\r
+ if (av.hasHiddenRows)\r
+ {\r
+ seq = av.alignment.getHiddenSequences().getHiddenSequence(lastrow);\r
+ if (seq == null)\r
+ {\r
+ int index =\r
+ av.alignment.getHiddenSequences().findIndexWithoutHiddenSeqs(\r
+ lastrow);\r
\r
- miniMe.setRGB(col,row,color);\r
+ seq = av.alignment.getSequenceAt(index);\r
+ }\r
+ else\r
+ {\r
+ hiddenRow = true;\r
+ }\r
+ }\r
+ else\r
+ {\r
+ seq = av.alignment.getSequenceAt(lastrow);\r
+ }\r
\r
+ if (seq == null)\r
+ {\r
+ System.out.println(lastrow + " null");\r
+ continue;\r
+ }\r
\r
- }\r
+ for (col = 0; col < width; col++)\r
+ {\r
+ if ( (int) (col * sampleCol) == lastcol &&\r
+ (int) (row * sampleRow) == lastrow)\r
+ {\r
+ miniMe.setRGB(col, row, color);\r
+ continue;\r
}\r
\r
- if (av.conservation != null)\r
+ lastcol = (int) (col * sampleCol);\r
+\r
+ if (seq.getLength() > lastcol)\r
{\r
- for (col = 0; col < width; col++)\r
+ color = sr.getResidueBoxColour(\r
+ seq, lastcol).getRGB();\r
+\r
+ if (av.showSequenceFeatures)\r
{\r
- lastcol = (int) (col * sampleCol);\r
- {\r
- mg.translate(col, sequencesHeight);\r
- ap.annotationPanel.drawGraph(mg, av.conservation,\r
- (int) (sampleCol) + 1,\r
- graphHeight,\r
- (int) (col * sampleCol),\r
- (int) (col * sampleCol) + 1);\r
- mg.translate( -col, -sequencesHeight);\r
- }\r
+ color = fr.findFeatureColour(color, seq, lastcol);\r
}\r
}\r
- System.gc();\r
-\r
- resizing = false;\r
-\r
- setBoxPosition();\r
-\r
- if(resizeAgain)\r
+ else\r
{\r
- resizeAgain = false;\r
- updateOverviewImage();\r
+ color = -1; //White\r
}\r
- }\r
\r
- /**\r
- * DOCUMENT ME!\r
- */\r
- public void setBoxPosition()\r
- {\r
- int fullsizeWidth = av.alignment.getWidth() * av.getCharWidth();\r
- int fullsizeHeight = (av.alignment.getHeight()\r
- +av.alignment.getHiddenSequences().getSize()) * av.getCharHeight();\r
+ if (hiddenRow ||\r
+ (av.hasHiddenColumns && !av.getColumnSelection().isVisible(lastcol)))\r
+ {\r
+ color = new Color(color).darker().darker().getRGB();\r
+ }\r
\r
- int startRes = av.getStartRes();\r
- int endRes = av.getEndRes();\r
+ miniMe.setRGB(col, row, color);\r
\r
- if(av.hasHiddenColumns)\r
- {\r
- startRes = av.getColumnSelection().adjustForHiddenColumns(startRes);\r
- endRes = av.getColumnSelection().adjustForHiddenColumns(endRes);\r
}\r
+ }\r
\r
- int startSeq = av.startSeq;\r
- int endSeq = av.endSeq;\r
-\r
- if (av.hasHiddenRows)\r
+ if (av.conservation != null)\r
+ {\r
+ for (col = 0; col < width; col++)\r
{\r
- startSeq =\r
- av.alignment.getHiddenSequences().adjustForHiddenSeqs(startSeq);\r
-\r
- endSeq =\r
- av.alignment.getHiddenSequences().adjustForHiddenSeqs(endSeq);\r
-\r
+ lastcol = (int) (col * sampleCol);\r
+ {\r
+ mg.translate(col, sequencesHeight);\r
+ ap.annotationPanel.drawGraph(mg, av.conservation,\r
+ (int) (sampleCol) + 1,\r
+ graphHeight,\r
+ (int) (col * sampleCol),\r
+ (int) (col * sampleCol) + 1);\r
+ mg.translate( -col, -sequencesHeight);\r
+ }\r
}\r
+ }\r
+ System.gc();\r
\r
+ resizing = false;\r
\r
- scalew = (float) width / (float) fullsizeWidth;\r
- scaleh = (float) sequencesHeight / (float) fullsizeHeight;\r
+ setBoxPosition();\r
\r
- boxX = (int) (startRes * av.getCharWidth() * scalew);\r
- boxY = (int) (startSeq * av.getCharHeight() * scaleh);\r
+ if (resizeAgain)\r
+ {\r
+ resizeAgain = false;\r
+ updateOverviewImage();\r
+ }\r
+ }\r
+\r
+ /**\r
+ * DOCUMENT ME!\r
+ */\r
+ public void setBoxPosition()\r
+ {\r
+ int fullsizeWidth = av.alignment.getWidth() * av.getCharWidth();\r
+ int fullsizeHeight = (av.alignment.getHeight()\r
+ + av.alignment.getHiddenSequences().getSize()) *\r
+ av.getCharHeight();\r
+\r
+ int startRes = av.getStartRes();\r
+ int endRes = av.getEndRes();\r
+\r
+ if (av.hasHiddenColumns)\r
+ {\r
+ startRes = av.getColumnSelection().adjustForHiddenColumns(startRes);\r
+ endRes = av.getColumnSelection().adjustForHiddenColumns(endRes);\r
+ }\r
\r
+ int startSeq = av.startSeq;\r
+ int endSeq = av.endSeq;\r
\r
+ if (av.hasHiddenRows)\r
+ {\r
+ startSeq =\r
+ av.alignment.getHiddenSequences().adjustForHiddenSeqs(startSeq);\r
\r
- if(av.hasHiddenColumns)\r
- boxWidth = (int) ((endRes - startRes + 1) * av.getCharWidth() * scalew);\r
- else\r
- boxWidth = (int) ((endRes - startRes + 1) * av.getCharWidth() * scalew);\r
+ endSeq =\r
+ av.alignment.getHiddenSequences().adjustForHiddenSeqs(endSeq);\r
\r
+ }\r
\r
- boxHeight = (int) ((endSeq - startSeq) * av.getCharHeight() * scaleh);\r
+ scalew = (float) width / (float) fullsizeWidth;\r
+ scaleh = (float) sequencesHeight / (float) fullsizeHeight;\r
\r
+ boxX = (int) (startRes * av.getCharWidth() * scalew);\r
+ boxY = (int) (startSeq * av.getCharHeight() * scaleh);\r
\r
- repaint();\r
+ if (av.hasHiddenColumns)\r
+ {\r
+ boxWidth = (int) ( (endRes - startRes + 1) * av.getCharWidth() * scalew);\r
}\r
-\r
- /**\r
- * DOCUMENT ME!\r
- *\r
- * @param g DOCUMENT ME!\r
- */\r
- public void paintComponent(Graphics g)\r
+ else\r
{\r
- if (miniMe != null && !resizing)\r
- {\r
- g.drawImage(miniMe, 0, 0, this);\r
- }\r
- else\r
- {\r
- g.setColor(Color.white);\r
- g.fillRect(0, 0, getWidth(), getHeight());\r
- g.setColor(Color.black);\r
- g.setFont(new Font("Verdana", Font.BOLD, 15));\r
- g.drawString("Recalculating", 5, sequencesHeight / 2);\r
- g.drawString("Overview.....", 5, (sequencesHeight / 2) + 20);\r
- }\r
+ boxWidth = (int) ( (endRes - startRes + 1) * av.getCharWidth() * scalew);\r
+ }\r
\r
+ boxHeight = (int) ( (endSeq - startSeq) * av.getCharHeight() * scaleh);\r
\r
- g.setColor(Color.red);\r
- g.drawRect(boxX, boxY, boxWidth, boxHeight);\r
- g.drawRect(boxX + 1, boxY + 1, boxWidth - 2, boxHeight - 2);\r
+ repaint();\r
+ }\r
\r
+ /**\r
+ * DOCUMENT ME!\r
+ *\r
+ * @param g DOCUMENT ME!\r
+ */\r
+ public void paintComponent(Graphics g)\r
+ {\r
+ if (miniMe != null && !resizing)\r
+ {\r
+ g.drawImage(miniMe, 0, 0, this);\r
}\r
+ else\r
+ {\r
+ g.setColor(Color.white);\r
+ g.fillRect(0, 0, getWidth(), getHeight());\r
+ g.setColor(Color.black);\r
+ g.setFont(new Font("Verdana", Font.BOLD, 15));\r
+ g.drawString("Recalculating", 5, sequencesHeight / 2);\r
+ g.drawString("Overview.....", 5, (sequencesHeight / 2) + 20);\r
+ }\r
+\r
+ g.setColor(Color.red);\r
+ g.drawRect(boxX, boxY, boxWidth, boxHeight);\r
+ g.drawRect(boxX + 1, boxY + 1, boxWidth - 2, boxHeight - 2);\r
+\r
+ }\r
}\r
git://source.jalview.org / jalview.git / blobdiff