getViewAsString can ignore sequenceGroup

[jalview.git] / src / jalview / gui / PopupMenu.java

diff --git a/src/jalview/gui/PopupMenu.java b/src/jalview/gui/PopupMenu.java
index ddb194e..6fbd0ee 100755 (executable)
--- a/src/jalview/gui/PopupMenu.java
+++ b/src/jalview/gui/PopupMenu.java
@@ -1183,7 +1183,7 @@ public class PopupMenu extends JPopupMenu
     if(ap.av.hasHiddenColumns)\r
     {\r
       System.out.println("PROMPT USER HERE");\r
-      omitHidden = ap.av.getSelectionAsString();\r
+      omitHidden = ap.av.getViewAsString(true);\r
     }\r
 \r
     cap.setText(new FormatAdapter().formatSequences(\r