JAL-842, AppVarnaBinding was filled with a minimalistic method to

[jalview.git] / src / jalview / gui / PopupMenu.java

diff --git a/src/jalview/gui/PopupMenu.java b/src/jalview/gui/PopupMenu.java
index e85da7a..a2b4ee3 100644 (file)
--- a/src/jalview/gui/PopupMenu.java
+++ b/src/jalview/gui/PopupMenu.java
@@ -254,7 +254,22 @@ public class PopupMenu extends JPopupMenu
       }
       else
       {
-        structureMenu.remove(viewStructureMenu);
+         //TODO: Something to check if it's an RNA
+         //like: if(seq.getAnnotation()[0].annotations[0].secondaryStructure == 'S')
+         menuItem = new JMenuItem();
+         menuItem.setText("RNA structure");
+          menuItem.addActionListener(new java.awt.event.ActionListener()
+          {
+            public void actionPerformed(ActionEvent e)
+            {
+               System.out.println("Call Varna");
+               new AppVarna();
+               
+            }
+          });
+          viewStructureMenu.add(menuItem);
+         
+        //JAN structureMenu.remove(viewStructureMenu);
         // structureMenu.remove(colStructureMenu);
       }