clear selection once group defined

[jalview.git] / src / jalview / gui / PopupMenu.java

diff --git a/src/jalview/gui/PopupMenu.java b/src/jalview/gui/PopupMenu.java
index 38c3250..c09093b 100755 (executable)
--- a/src/jalview/gui/PopupMenu.java
+++ b/src/jalview/gui/PopupMenu.java
@@ -324,6 +324,10 @@ public class PopupMenu extends JPopupMenu
     if( superG !=null)\r
       superG.setSuperGroupProperties( sg );\r
 \r
+\r
+    //once group is defined, remove selection rubberband\r
+    ap.av.setRubberbandGroup(null);\r
+\r
     ap.seqPanel.seqCanvas.paintFlag=true;\r
     ap.seqPanel.repaint();\r
   }\r
@@ -490,6 +494,7 @@ public class PopupMenu extends JPopupMenu
 \r
     // this method won't add a new group if it already exists\r
     ap.av.alignment.addGroup(sg);\r
+\r
     return sg;\r
   }\r
 \r