});
add(menuItem);
- if (sequence.isHMMConsensusSequence())
+ if (sequence.hasHMMProfile())
{
JMenuItem selectHMM = new JCheckBoxMenuItem();
selectHMM.setText(MessageManager.getString("label.select_hmm"));
protected void selectHMM_actionPerformed(SequenceI seq)
{
// TODO move this to Viewport
- if (seq.isHMMConsensusSequence())
+ if (seq.hasHMMProfile())
{
ap.alignFrame.setSelectedHMMSequence(seq);
}