ID_ITALICS option in preferences

[jalview.git] / src / jalview / gui / Preferences.java

diff --git a/src/jalview/gui/Preferences.java b/src/jalview/gui/Preferences.java
index a1e5c61..b58c72d 100755 (executable)
--- a/src/jalview/gui/Preferences.java
+++ b/src/jalview/gui/Preferences.java
@@ -1,6 +1,6 @@
 /*\r
  * Jalview - A Sequence Alignment Editor and Viewer\r
- * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
  *\r
  * This program is free software; you can redistribute it and/or\r
  * modify it under the terms of the GNU General Public License\r
@@ -92,6 +92,7 @@ public class Preferences extends GPreferences
         frame.setMinimumSize(new Dimension(width, height));\r
 \r
         seqLimit.setSelected(    Cache.getDefault("SHOW_JVSUFFIX", true));\r
+        rightAlign.setSelected(  Cache.getDefault("RIGHT_ALIGN_IDS", false));\r
         fullScreen.setSelected(  Cache.getDefault("SHOW_FULLSCREEN", false));\r
         annotations.setSelected( Cache.getDefault("SHOW_ANNOTATIONS", true));\r
 \r
@@ -135,6 +136,8 @@ public class Preferences extends GPreferences
 \r
         smoothFont.setSelected(Cache.getDefault("ANTI_ALIAS", false));\r
 \r
+        idItalics.setSelected(Cache.getDefault("ID_ITALICS", true));\r
+\r
         wrap.setSelected(Cache.getDefault("WRAP_ALIGNMENT", false));\r
 \r
         gapSymbolCB.addItem("-");\r
@@ -211,6 +214,7 @@ public class Preferences extends GPreferences
     {\r
 \r
       Cache.applicationProperties.setProperty("SHOW_JVSUFFIX", Boolean.toString(seqLimit.isSelected()));\r
+      Cache.applicationProperties.setProperty("RIGHT_ALIGN_IDS", Boolean.toString(rightAlign.isSelected()));\r
       Cache.applicationProperties.setProperty("SHOW_FULLSCREEN", Boolean.toString(fullScreen.isSelected()));\r
 \r
       Cache.applicationProperties.setProperty("SHOW_ANNOTATIONS", Boolean.toString(annotations.isSelected()));\r
@@ -225,6 +229,8 @@ public class Preferences extends GPreferences
       Cache.applicationProperties.setProperty("FONT_STYLE", fontStyleCB.getSelectedItem().toString());\r
       Cache.applicationProperties.setProperty("FONT_SIZE", fontSizeCB.getSelectedItem().toString());\r
 \r
+      Cache.applicationProperties.setProperty("ID_ITALICS", Boolean.toString(idItalics.isSelected()));\r
+\r
       Cache.applicationProperties.setProperty("ANTI_ALIAS", Boolean.toString(smoothFont.isSelected()));\r
 \r
       Cache.applicationProperties.setProperty("WRAP_ALIGNMENT", Boolean.toString(wrap.isSelected()));\r