Highlight from alignment

[jalview.git] / src / jalview / gui / SeqPanel.java

diff --git a/src/jalview/gui/SeqPanel.java b/src/jalview/gui/SeqPanel.java
index 491b667..3209960 100755 (executable)
--- a/src/jalview/gui/SeqPanel.java
+++ b/src/jalview/gui/SeqPanel.java
@@ -357,6 +357,12 @@ public class SeqPanel extends JPanel
         return;\r
       }\r
 \r
+      if(seqCanvas.pdbCanvas!=null && sequence==seqCanvas.pdbCanvas.sequence)\r
+      {\r
+        seqCanvas.pdbCanvas.highlightRes(sequence.findPosition(res));\r
+      }\r
+\r
+\r
         StringBuffer text = new StringBuffer("Sequence " + (seq + 1) + " ID: " +\r
                 sequence.getName());\r
 \r
@@ -1003,7 +1009,7 @@ public class SeqPanel extends JPanel
 \r
                 try\r
                 {\r
-                    Thread.sleep(75);\r
+                    Thread.sleep(20);\r
                 }\r
                 catch (Exception ex)\r
                 {\r