{\r
Vector tmp = new Vector();\r
SequenceFeature[] features = sequence.getSequenceFeatures();\r
-\r
if (features != null)\r
{\r
for (int i = 0; i < features.length; i++)\r
|| !av.featuresDisplayed.containsKey(features[i].getType()))\r
continue;\r
\r
- if ( (features[i].getBegin() <= sequence.findPosition(res)) &&\r
- (features[i].getEnd() >= sequence.findPosition(res)))\r
+ if ( (features[i].getBegin() <= res) &&\r
+ (features[i].getEnd() >= res))\r
{\r
tmp.addElement(features[i]);\r
}\r
tooltipText.setLength(6); // Cuts the buffer back to <html>\r
\r
SequenceFeature[] features = findFeaturesAtRes(\r
- sequence.getDatasetSequence(), res);\r
+ sequence.getDatasetSequence(), sequence.findPosition(res));\r
\r
if(features!=null)\r
{\r
}\r
}\r
\r
-\r
if(tooltipText.length()==6) // <html></html>\r
{\r
\r
\r
public void mouseClicked(MouseEvent evt)\r
{\r
+ SequenceI sequence = av.alignment.getSequenceAt( findSeq(evt) );\r
if(evt.getClickCount()>1)\r
{\r
+ if (av.getSelectionGroup().getSize(false) == 1\r
+ && av.getSelectionGroup().getEndRes()\r
+ - av.getSelectionGroup().getStartRes() < 2)\r
+ av.setSelectionGroup(null);\r
\r
SequenceFeature[] features = findFeaturesAtRes(\r
- av.alignment.getSequenceAt( findSeq(evt) ).getDatasetSequence(),\r
- findRes(evt)\r
+ sequence.getDatasetSequence(),\r
+ sequence.findPosition( findRes(evt) )\r
);\r
- for(int f=0; f<features.length; f++)\r
- System.out.println("SELECT: "+features[f].getType()+" "\r
- +features[f].getBegin()+" "+features[f].getEnd());\r
\r
+ if(features!=null && features.length==1)\r
+ {\r
+ SearchResults highlight = new SearchResults();\r
+ highlight.addResult(sequence,\r
+ features[0].getBegin(),\r
+ features[0].getEnd());\r
+ seqCanvas.highlightSearchResults(highlight);\r
+ }\r
+ if(features!=null)\r
+ {\r
+ seqCanvas.getFeatureRenderer().amendFeatures(\r
+ new SequenceI[]\r
+ {sequence}, features, false);\r
+\r
+ seqCanvas.highlightSearchResults(null);\r
+ }\r
}\r
}\r
\r
return;\r
}\r
\r
- if(res> av.alignment.getWidth())\r
+ if(res>= av.alignment.getWidth())\r
{\r
res = av.alignment.getWidth()-1;\r
}\r