JAL-3303 suppressed for 2.11.1

[jalview.git] / src / jalview / gui / SeqPanel.java

diff --git a/src/jalview/gui/SeqPanel.java b/src/jalview/gui/SeqPanel.java
index 14c3818..cd1bc7b 100644 (file)
--- a/src/jalview/gui/SeqPanel.java
+++ b/src/jalview/gui/SeqPanel.java
@@ -865,7 +865,8 @@ public class SeqPanel extends JPanel
     {
       setStatusMessage(results);
     }
-    return results.isEmpty() ? null : getHighlightInfo(results);
+    // JAL-3303 feature suppressed for now pending review
+    return null; // results.isEmpty() ? null : getHighlightInfo(results);
   }
 
   /**
@@ -910,12 +911,12 @@ public class SeqPanel extends JPanel
                 .findComplementFeaturesAtResidue(ds, pos);
         if (mf != null)
         {
-          List<String> pv = mf.findProteinVariants();
-          for (String s : pv)
+          for (SequenceFeature sf : mf.features)
           {
-            if (!infos.contains(s))
+            String pv = mf.findProteinVariants(sf);
+            if (pv.length() > 0 && !infos.contains(pv))
             {
-              infos.addAll(pv);
+              infos.add(pv);
             }
           }
         }
@@ -1065,7 +1066,7 @@ public class SeqPanel extends JPanel
                   pos);
           if (mf != null)
           {
-            seqARep.appendFeatures(tooltipText, pos, mf.features, fr2);
+            seqARep.appendFeatures(tooltipText, pos, mf, fr2);
           }
         }
       }