Typo

[jalview.git] / src / jalview / gui / SequenceFetcher.java

diff --git a/src/jalview/gui/SequenceFetcher.java b/src/jalview/gui/SequenceFetcher.java
index 498489d..67a3eff 100755 (executable)
--- a/src/jalview/gui/SequenceFetcher.java
+++ b/src/jalview/gui/SequenceFetcher.java
@@ -249,7 +249,7 @@ public class SequenceFetcher
       while (en.hasMoreElements())\r
       {\r
         UniprotEntry entry = (UniprotEntry) en.nextElement();\r
-        StringBuffer name = new StringBuffer(">Uniprot/Swiss-Prot");\r
+        StringBuffer name = new StringBuffer(">UniProt/Swiss-Prot");\r
         Enumeration en2 = entry.getAccession().elements();\r
         while (en2.hasMoreElements())\r
         {\r
@@ -288,8 +288,15 @@ public class SequenceFetcher
         }\r
 \r
         sequence[i].getDatasetSequence().setPDBId(onlyPdbEntries);\r
-        sequence[i].getDatasetSequence().setSequenceFeatures(entry.getFeature());\r
-\r
+        if (entry.getFeature() != null)\r
+        {\r
+          e = entry.getFeature().elements();\r
+          while (e.hasMoreElements())\r
+          {\r
+            sequence[i].getDatasetSequence().addSequenceFeature( (\r
+                SequenceFeature) e.nextElement());\r
+          }\r
+        }\r
       }\r
     }\r
   }\r
@@ -338,7 +345,7 @@ public class SequenceFetcher
 \r
   SequenceI[] parseResult(String result, String title)\r
   {\r
-    String format = IdentifyFile.Identify(result, "Paste");\r
+    String format = new IdentifyFile().Identify(result, "Paste");\r
     SequenceI[] sequences = null;\r
 \r
     if (FormatAdapter.formats.contains(format))\r