JAL-1821 updated implementation of launchStructureViewer method to use currently...

[jalview.git] / src / jalview / gui / SequenceFetcher.java

diff --git a/src/jalview/gui/SequenceFetcher.java b/src/jalview/gui/SequenceFetcher.java
index 6a0c712..c330a92 100755 (executable)
--- a/src/jalview/gui/SequenceFetcher.java
+++ b/src/jalview/gui/SequenceFetcher.java
@@ -20,7 +20,6 @@
  */
 package jalview.gui;
 
-import jalview.datamodel.Alignment;
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.DBRefEntry;
 import jalview.datamodel.DBRefSource;
@@ -178,8 +177,7 @@ public class SequenceFetcher extends JPanel implements Runnable
       jalview.ws.SequenceFetcher sf = new jalview.ws.SequenceFetcher();
       if (guiWindow != null)
       {
-        guiWindow.setProgressBar(MessageManager.getString("status.init_sequence_database_fetchers"),
-                Thread.currentThread().hashCode());
+        guiWindow.setProgressBar(null, Thread.currentThread().hashCode());
       }
       lastDasSourceRegistry = (dasRegistry.getDasRegistryURL() + dasRegistry
               .getLocalSourceString()).hashCode();
@@ -775,7 +773,7 @@ public class SequenceFetcher extends JPanel implements Runnable
   AlignmentI parseResult(String result, String title)
   {
     String format = new IdentifyFile().Identify(result, "Paste");
-    Alignment sequences = null;
+    AlignmentI sequences = null;
     if (FormatAdapter.isValidFormat(format))
     {
       sequences = null;