JAL-1911 bugfix - do not save i18n text in preference file

[jalview.git] / src / jalview / gui / SequenceFetcher.java

diff --git a/src/jalview/gui/SequenceFetcher.java b/src/jalview/gui/SequenceFetcher.java
index d5a04a9..e567d20 100755 (executable)
--- a/src/jalview/gui/SequenceFetcher.java
+++ b/src/jalview/gui/SequenceFetcher.java
@@ -919,7 +919,7 @@ public class SequenceFetcher extends JPanel implements Runnable
         }
         if (Cache.getDefault("HIDE_INTRONS", true))
         {
-          hideIntronsIfPresent(af);
+          af.hideFeatureColumns(SequenceOntologyI.EXON, false);
         }
 
         Desktop.addInternalFrame(af, title, AlignFrame.DEFAULT_WIDTH,
@@ -944,25 +944,6 @@ public class SequenceFetcher extends JPanel implements Runnable
     return al;
   }
 
-  /**
-   * Hide columns not containing 'exon' features, provided there are exon
-   * features on the alignment
-   * 
-   * @param af
-   */
-  public void hideIntronsIfPresent(AlignFrame af)
-  {
-    boolean hasExons = af.avc.markColumnsContainingFeatures(false, false,
-            false,
-            SequenceOntologyI.EXON);
-    if (hasExons)
-    {
-      af.avc.markColumnsContainingFeatures(true, false, true,
-              SequenceOntologyI.EXON);
-      af.getViewport().hideSelectedColumns();
-    }
-  }
-
   void showErrorMessage(final String error)
   {
     resetDialog();