/*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
+ * Copyright (C) 2015 The Jalview Authors
*
* This file is part of Jalview.
*
*/
package jalview.gui;
-import java.awt.Rectangle;
-import java.util.ArrayList;
-import java.util.List;
-
import jalview.api.structures.JalviewStructureDisplayI;
import jalview.bin.Cache;
import jalview.datamodel.PDBEntry;
import jalview.datamodel.StructureViewerModel;
import jalview.structure.StructureSelectionManager;
+import java.awt.Rectangle;
+import java.util.ArrayList;
+import java.util.List;
+
/**
* proxy for handling structure viewers.
*
* @return
*/
private JalviewStructureDisplayI onlyOnePdb(PDBEntry[] pdbs,
- SequenceI[][] seqsForPdbs,
- AlignmentPanel ap)
+ SequenceI[][] seqsForPdbs, AlignmentPanel ap)
{
List<SequenceI> seqs = new ArrayList<SequenceI>();
if (pdbs == null || pdbs.length == 0)
*/
public JalviewStructureDisplayI createView(ViewerType type,
String[] pdbf, String[] id, SequenceI[][] sq,
- AlignmentPanel alignPanel, StructureViewerModel viewerData, String fileloc,
- Rectangle rect, String vid)
+ AlignmentPanel alignPanel, StructureViewerModel viewerData,
+ String fileloc, Rectangle rect, String vid)
{
final boolean useinViewerSuperpos = viewerData.isAlignWithPanel();
final boolean usetoColourbyseq = viewerData.isColourWithAlignPanel();