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JAL-2629 fix search scores being read in incorrectly
[jalview.git] / src / jalview / hmmer / JackHMMER.java
diff --git a/src/jalview/hmmer/JackHMMER.java b/src/jalview/hmmer/JackHMMER.java
index 1731439..16dcebb 100644 (file)
--- a/src/jalview/hmmer/JackHMMER.java
+++ b/src/jalview/hmmer/JackHMMER.java
@@ -361,7 +361,7 @@ public class JackHMMER extends HmmerCommand
       annot.setEValue(dEValue);
 
       double dBitScore = Double.parseDouble(bitScore);
-      annot.setEValue(dBitScore);
+      annot.setBitScore(dBitScore);
 
       annot.setSequenceRef(seq);
       seq.addAlignmentAnnotation(annot);