-/**
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
*
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
*/
package jalview.io;
*/
public void writeProperties(PrintWriter pw, boolean html)
{
- final String nl = html ? "<br>" : "\n";
+ final String nl = html ? "<br>" : System.getProperty("line.separator");
float avg = 0;
int min = Integer.MAX_VALUE, max = 0;
for (int i = 0; i < alignment.getHeight(); i++)
min = size;
}
avg = avg / (float) alignment.getHeight();
- pw.append(nl);
- pw.append("Sequences: " + alignment.getHeight());
- pw.append(nl);
- pw.append("Minimum Sequence Length: " + min);
- pw.append(nl);
- pw.append("Maximum Sequence Length: " + max);
- pw.append(nl);
- pw.append("Average Length: " + (int) avg);
+ pw.print(nl);
+ pw.print("Sequences: " + alignment.getHeight());
+ pw.print(nl);
+ pw.print("Minimum Sequence Length: " + min);
+ pw.print(nl);
+ pw.print("Maximum Sequence Length: " + max);
+ pw.print(nl);
+ pw.print("Average Length: " + (int) avg);
if (((Alignment) alignment).alignmentProperties != null)
{
- pw.append(nl);
- pw.append(nl);
+ pw.print(nl);
+ pw.print(nl);
if (html)
{
- pw.append("<table border=\"1\">");
+ pw.print("<table border=\"1\">");
}
Hashtable props = ((Alignment) alignment).alignmentProperties;
Enumeration en = props.keys();
}
pos = npos + 1;
} while (npos != -1);
- pw.append("<tr><td>" + key + "</td><td>" + val + "</td></tr>");
+ pw.print("<tr><td>" + key + "</td><td>" + val + "</td></tr>");
}
else
{
- pw.append("\n" + key + "\t" + vals);
+ pw.print(nl + key + "\t" + vals);
}
}
if (html)
{
- pw.append("</table>");
+ pw.print("</table>");
}
}
}