JAL-3365 expand range of allowed DSSP secondary structure symbols in Stockholm files

[jalview.git] / src / jalview / io / AlignmentProperties.java

diff --git a/src/jalview/io/AlignmentProperties.java b/src/jalview/io/AlignmentProperties.java
index 88e3814..f2a6150 100644 (file)
--- a/src/jalview/io/AlignmentProperties.java
+++ b/src/jalview/io/AlignmentProperties.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -20,14 +20,14 @@
  */
 package jalview.io;
 
-import java.io.StringWriter;
+import jalview.datamodel.Alignment;
+import jalview.datamodel.AlignmentI;
+
 import java.io.PrintWriter;
+import java.io.StringWriter;
 import java.util.Enumeration;
 import java.util.Hashtable;
 
-import jalview.datamodel.Alignment;
-import jalview.datamodel.AlignmentI;
-
 /**
  * Render associated attributes of an alignment. The heart of this code was
  * refactored from jalview.gui.AlignFrame and jalview.appletgui.AlignFrame TODO:
@@ -61,11 +61,15 @@ public class AlignmentProperties
               - alignment.getSequenceAt(i).getStart();
       avg += size;
       if (size > max)
+      {
         max = size;
+      }
       if (size < min)
+      {
         min = size;
+      }
     }
-    avg = avg / (float) alignment.getHeight();
+    avg = avg / alignment.getHeight();
     pw.print(nl);
     pw.print("Sequences: " + alignment.getHeight());
     pw.print(nl);