Further tweaks to get tests passing

[jalview.git] / src / jalview / io / AppletFormatAdapter.java

diff --git a/src/jalview/io/AppletFormatAdapter.java b/src/jalview/io/AppletFormatAdapter.java
index e0a607b..5f40713 100755 (executable)
--- a/src/jalview/io/AppletFormatAdapter.java
+++ b/src/jalview/io/AppletFormatAdapter.java
@@ -435,7 +435,7 @@ public class AppletFormatAdapter
   {
     try
     {
-      AlignmentFileI afile = format.getAlignmentFile();
+      AlignmentFileI afile = format.getAlignmentFile(alignment);
 
       afile.setNewlineString(newline);
       afile.setExportSettings(exportSettings);